STRINGSTRING
Sdel_1186 Sdel_1186 Sdel_1187 Sdel_1187 Sdel_1188 Sdel_1188 Sdel_1189 Sdel_1189 Sdel_1190 Sdel_1190
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_1186PFAM: carbon starvation protein CstA; KEGG: stm:STM0600 carbon starvation protein. (707 aa)
Sdel_1187PFAM: protein of unknown function DUF466; KEGG: sew:SeSA_A0759 hypothetical protein. (66 aa)
Sdel_1188PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: eic:NT01EI_2791 hypothetical protein. (339 aa)
Sdel_1189PFAM: aminotransferase class I and II; KEGG: msu:MS1248 AvtA protein. (376 aa)
Sdel_1190KEGG: dar:Daro_2349 peptidylprolyl isomerase, FKBP- type. (156 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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