Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Sdel_0179 | Sdel_1841 | Sdel_0179 | Sdel_1841 | PFAM: band 7 protein; SMART: band 7 protein; KEGG: cco:CCC13826_2108 SPFH domain-containing protein. | PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase; KEGG: nis:NIS_1070 hypothetical protein. | 0.833 |
| Sdel_0179 | ftsH | Sdel_0179 | Sdel_1761 | PFAM: band 7 protein; SMART: band 7 protein; KEGG: cco:CCC13826_2108 SPFH domain-containing protein. | ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.903 |
| Sdel_0391 | Sdel_1031 | Sdel_0391 | Sdel_1031 | PFAM: heat shock protein Hsp20; KEGG: tcx:Tcr_2022 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | 0.570 |
| Sdel_0391 | Sdel_1400 | Sdel_0391 | Sdel_1400 | PFAM: heat shock protein Hsp20; KEGG: tcx:Tcr_2022 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: nis:NIS_0876 ATP-dependent Clp protease, ATP- binding subunit ClpB; Belongs to the ClpA/ClpB family. | 0.844 |
| Sdel_0391 | dnaK | Sdel_0391 | Sdel_1358 | PFAM: heat shock protein Hsp20; KEGG: tcx:Tcr_2022 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.751 |
| Sdel_0391 | grpE | Sdel_0391 | Sdel_1359 | PFAM: heat shock protein Hsp20; KEGG: tcx:Tcr_2022 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.678 |
| Sdel_0391 | hslV | Sdel_0391 | Sdel_1030 | PFAM: heat shock protein Hsp20; KEGG: tcx:Tcr_2022 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | 20S proteasome A and B subunits; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.592 |
| Sdel_0391 | htpG | Sdel_0391 | Sdel_1407 | PFAM: heat shock protein Hsp20; KEGG: tcx:Tcr_2022 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | Heat shock protein Hsp90-like protein; Molecular chaperone. Has ATPase activity. | 0.730 |
| Sdel_0391 | lon | Sdel_0391 | Sdel_0860 | PFAM: heat shock protein Hsp20; KEGG: tcx:Tcr_2022 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.543 |
| Sdel_1031 | Sdel_0391 | Sdel_1031 | Sdel_0391 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | PFAM: heat shock protein Hsp20; KEGG: tcx:Tcr_2022 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | 0.570 |
| Sdel_1031 | Sdel_1400 | Sdel_1031 | Sdel_1400 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: nis:NIS_0876 ATP-dependent Clp protease, ATP- binding subunit ClpB; Belongs to the ClpA/ClpB family. | 0.565 |
| Sdel_1031 | clpP | Sdel_1031 | Sdel_2158 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.452 |
| Sdel_1031 | clpX | Sdel_1031 | Sdel_0186 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.477 |
| Sdel_1031 | dnaJ | Sdel_1031 | Sdel_0562 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.914 |
| Sdel_1031 | dnaK | Sdel_1031 | Sdel_1358 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.759 |
| Sdel_1031 | groL | Sdel_1031 | Sdel_0755 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.885 |
| Sdel_1031 | groS | Sdel_1031 | Sdel_0756 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.865 |
| Sdel_1031 | grpE | Sdel_1031 | Sdel_1359 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.911 |
| Sdel_1031 | hslV | Sdel_1031 | Sdel_1030 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | 20S proteasome A and B subunits; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.999 |
| Sdel_1031 | htpG | Sdel_1031 | Sdel_1407 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | Heat shock protein Hsp90-like protein; Molecular chaperone. Has ATPase activity. | 0.861 |
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