STRINGSTRING
Sdel_0086 Sdel_0086 Sdel_0088 Sdel_0088 Sdel_0089 Sdel_0089 Sdel_0090 Sdel_0090 Sdel_0091 Sdel_0091 Sdel_0092 Sdel_0092 Sdel_0093 Sdel_0093 Sdel_0385 Sdel_0385 Sdel_1092 Sdel_1092 Sdel_1592 Sdel_1592 Sdel_1899 Sdel_1899 Sdel_1932 Sdel_1932 Sdel_2253 Sdel_2253
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_0086KEGG: sun:SUN_0071 hypothetical protein. (222 aa)
Sdel_0088KEGG: cco:CCC13826_1645 putative phage integrase. (238 aa)
Sdel_0089KEGG: abu:Abu_1069 hypothetical protein. (207 aa)
Sdel_0090PFAM: glutathionylspermidine synthase; KEGG: abu:Abu_1068 glutathionylspermidine synthase family protein. (393 aa)
Sdel_0091PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ccv:CCV52592_1540 glycerate dehydrogenase. (310 aa)
Sdel_0092PFAM: protein of unknown function DUF520; KEGG: cco:CCC13826_1649 putative nucleotide-binding protein; Belongs to the UPF0234 family. (165 aa)
Sdel_0093KEGG: tdn:Suden_1266 hypothetical protein. (99 aa)
Sdel_0385PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: cha:CHAB381_1616 iron-sulfur cluster-binding domain-containing protein. (420 aa)
Sdel_1092TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nis:NIS_1852 HAD-superfamily hydrolase. (212 aa)
Sdel_1592D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: cha:CHAB381_1615 glycolate oxidase, subunit GlcD. (459 aa)
Sdel_1899TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sun:SUN_0197 HAD-superfamily hydrolase. (212 aa)
Sdel_1932TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dal:Dalk_1233 HAD-superfamily hydrolase, subfamily IA, variant 1. (218 aa)
Sdel_2253KEGG: glycerate kinase; K00865 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family. (380 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.