STRINGSTRING
Sdel_0088 Sdel_0088 Sdel_0089 Sdel_0089 Sdel_0090 Sdel_0090 Sdel_0092 Sdel_0092 Sdel_0093 Sdel_0093
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_0088KEGG: cco:CCC13826_1645 putative phage integrase. (238 aa)
Sdel_0089KEGG: abu:Abu_1069 hypothetical protein. (207 aa)
Sdel_0090PFAM: glutathionylspermidine synthase; KEGG: abu:Abu_1068 glutathionylspermidine synthase family protein. (393 aa)
Sdel_0092PFAM: protein of unknown function DUF520; KEGG: cco:CCC13826_1649 putative nucleotide-binding protein; Belongs to the UPF0234 family. (165 aa)
Sdel_0093KEGG: tdn:Suden_1266 hypothetical protein. (99 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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