STRINGSTRING
Sdel_1380 Sdel_1380 Sdel_1381 Sdel_1381 Sdel_1382 Sdel_1382 Sdel_1383 Sdel_1383 Sdel_1384 Sdel_1384 Sdel_1385 Sdel_1385 Sdel_1386 Sdel_1386
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_1380PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: cff:CFF8240_0767 sodium/hydrogen exchanger family protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (540 aa)
Sdel_1381PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: ccv:CCV52592_1862 putative heat shock protein HspR. (124 aa)
Sdel_1382PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: abu:Abu_1361 curved DNA-binding protein CbpA. (297 aa)
Sdel_1383Protease Do; KEGG: cff:CFF8240_0764 peptidase S1C, Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. (472 aa)
Sdel_1384PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ccv:CCV52592_0808 alkaline phosphatase synthesis transcriptional regulatory protein PhoP. (226 aa)
Sdel_1385PFAM: histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cff:CFF8240_0762 sensor histidine kinase. (411 aa)
Sdel_1386KEGG: cco:CCC13826_1061 hypothetical protein. (135 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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