STRINGSTRING
Sdel_0805 Sdel_0805 Sdel_0806 Sdel_0806 Sdel_0807 Sdel_0807 Sdel_0808 Sdel_0808 Sdel_2072 Sdel_2072 Sdel_2073 Sdel_2073 Sdel_2074 Sdel_2074
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_0805PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: tdn:Suden_0820 formate dehydrogenase alpha subunit. (186 aa)
Sdel_0806PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: cco:CCC13826_0208 fumarate hydratase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (749 aa)
Sdel_0807PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nam:NAMH_1308 formate dehydrogenase subunit B. (199 aa)
Sdel_0808TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: dps:DP2988 formate dehydrogenase, gamma subunit. (299 aa)
Sdel_2072TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: cjd:JJD26997_1861 formate dehydrogenase, cytochrome b subunit. (299 aa)
Sdel_2073PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_0209 cytoplasmic membrane protein. (210 aa)
Sdel_2074PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dps:DP2986 formate dehydrogenase, chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (749 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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