STRINGSTRING
Sdel_1561 Sdel_1561 Sdel_1564 Sdel_1564 Sdel_1224 Sdel_1224 Sdel_0716 Sdel_0716 Sdel_1566 Sdel_1566 Sdel_1574 Sdel_1574 Sdel_2061 Sdel_2061 Sdel_2065 Sdel_2065 Sdel_1559 Sdel_1559
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_1561PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: wsu:WS1425 outer membrane receptor for iron- regulated colicin I receptor, porin,requires TonB gene product colicin I receptor. (681 aa)
Sdel_1564PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: wsu:WS1416 TonB-dependent receptor. (654 aa)
Sdel_1224PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: dvl:Dvul_0846 TonB-dependent receptor, plug. (908 aa)
Sdel_0716TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: wsu:WS1426 hypothetical protein. (212 aa)
Sdel_1566TIGRFAM: TonB family protein; KEGG: tdn:Suden_1004 TonB-like. (251 aa)
Sdel_1574PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: abu:Abu_0340 TonB-dependent receptor protein. (695 aa)
Sdel_2061PFAM: TonB-dependent receptor; KEGG: pca:Pcar_0160 outer membrane receptor protein. (742 aa)
Sdel_2065TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: tdn:Suden_1544 TonB-like. (201 aa)
Sdel_1559PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: tdn:Suden_1005 TonB-dependent receptor. (706 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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