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| | Sdel_2283 | PFAM: major facilitator superfamily MFS_1; KEGG: abu:Abu_2280 major facilitator transporter. (362 aa) |
| | Sdel_0012 | TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: csa:Csal_1475 Bcr/CflA subfamily drug resistance transporter. (395 aa) |
| | Sdel_0018 | TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; TrkA-C domain protein; KEGG: dps:DP0976 hypothetical protein. (529 aa) |
| | Sdel_0019 | PFAM: outer membrane porin; KEGG: wsu:WS0983 hypothetical protein. (402 aa) |
| | Sdel_0021 | TIGRFAM: nickel ABC transporter, permease subunit NikB; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS0985 nickel transport system permease. (311 aa) |
| | Sdel_0022 | TIGRFAM: nickel ABC transporter, permease subunit NikC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS0986 oligopeptide ABC transporter permease. (273 aa) |
| | Sdel_0025 | TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: wsu:WS0989 DNA-damage-inducible protein. (433 aa) |
| | Sdel_0036 | PFAM: protein of unknown function DUF6 transmembrane; KEGG: wsu:WS0127 putative integral membrane protein. (298 aa) |
| | Sdel_0076 | PFAM: TrkA-N domain protein; KEGG: nis:NIS_1717 potassium uptake protein. (562 aa) |
| | Sdel_0111 | PFAM: major facilitator superfamily MFS_1; KEGG: ccv:CCV52592_1627 major facilitator transporter. (396 aa) |
| | Sdel_0118 | PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: cjd:JJD26997_0543 ubiquinol--cytochrome c reductase, iron-sulfur subunit. (166 aa) |
| | Sdel_0123 | TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS0280 ABC transporter permease. (321 aa) |
| | Sdel_0124 | PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: nam:NAMH_0584 binding component of abc transporter. (266 aa) |
| | Sdel_0125 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS0277 amino acid permease ATP-binding protein. (246 aa) |
| | Sdel_0128 | PFAM: protein of unknown function DUF6 transmembrane; KEGG: ccv:CCV52592_1481 hypothetical protein. (301 aa) |
| | Sdel_0135 | PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: wsu:WS0236 hypothetical protein. (405 aa) |
| | Sdel_0138 | NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. (132 aa) |
| | nuoB | NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (169 aa) |
| | nuoC | NADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (266 aa) |
| | Sdel_0147 | NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (184 aa) |
| | Sdel_0149 | TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: nis:NIS_0300 NADH dehydrogenase subunit L. (618 aa) |
| | Sdel_0150 | TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sun:SUN_2219 NADH dehydrogenase subunit M. (508 aa) |
| | nuoN | Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (494 aa) |
| | Sdel_0276 | KEGG: scl:sce8829 hypothetical protein. (103 aa) |
| | Sdel_0302 | PFAM: WbqC-like family protein; KEGG: mmw:Mmwyl1_0831 WbqC-like family protein. (230 aa) |
| | Sdel_0304 | KEGG: nmu:Nmul_A0286 hypothetical protein. (120 aa) |
| | Sdel_0311 | PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: ent:Ent638_0572 major facilitator transporter. (437 aa) |
| | Sdel_0314 | TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: wsu:WS0748 immunogenic protein. (317 aa) |
| | Sdel_0340 | PFAM: protein of unknown function DUF6 transmembrane; KEGG: cff:CFF8240_0754 hypothetical protein. (285 aa) |
| | secE | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (59 aa) |
| | metN | ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (319 aa) |
| | Sdel_0366 | PFAM: outer membrane porin; KEGG: wsu:WS0983 hypothetical protein. (403 aa) |
| | mscL | Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. (142 aa) |
| | Sdel_0388 | PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4309 sugar efflux transporter. (390 aa) |
| | Sdel_0399 | PFAM: protein of unknown function UPF0118; KEGG: cju:C8J_1281 hypothetical protein. (346 aa) |
| | tatA | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (78 aa) |
| | Sdel_0417 | KEGG: nis:NIS_0307 hypothetical protein. (635 aa) |
| | Sdel_0425 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: abu:Abu_0216 oligopeptide ABC transporter, permease protein. (322 aa) |
| | Sdel_0440 | KEGG: nis:NIS_1243 hypothetical protein. (250 aa) |
| | Sdel_0445 | TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter; KEGG: abu:Abu_0361 C4-dicarboxylate transport protein. (427 aa) |
| | Sdel_0446 | PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: wsu:WS1864 small integral C4-dicarboxylate membrane transport protein,putative. (187 aa) |
| | Sdel_0464 | PFAM: Gluconate transporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: shw:Sputw3181_2630 gluconate transporter. (446 aa) |
| | Sdel_0469 | PFAM: outer membrane porin; KEGG: glo:Glov_3627 outer membrane porin. (432 aa) |
| | Sdel_0474 | PFAM: outer membrane porin; KEGG: wsu:WS0983 hypothetical protein. (407 aa) |
| | Sdel_0476 | PFAM: inner-membrane translocator; KEGG: cff:CFF8240_0400 hydrophobic amino acid ABC transporter permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family. (294 aa) |
| | Sdel_0477 | PFAM: inner-membrane translocator; KEGG: cla:Cla_1113 branched-chain amino-acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (345 aa) |
| | Sdel_0510 | PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: ccv:CCV52592_1733 F0F1 ATP synthase subunit B'; Belongs to the ATPase B chain family. (140 aa) |
| | atpF | H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (171 aa) |
| | atpH | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (176 aa) |
| | atpA | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (501 aa) |
| | atpG | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (294 aa) |
| | atpD | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (465 aa) |
| | atpC | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (131 aa) |
| | Sdel_0517 | PFAM: MotA/TolQ/ExbB proton channel; KEGG: cff:CFF8240_1523 ExbB/TolQ family transport protein. (195 aa) |
| | Sdel_0518 | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cff:CFF8240_1522 ExbD/TolR family transport protein. (130 aa) |
| | pal | OmpA/MotB domain protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (166 aa) |
| | Sdel_0552 | PFAM: amino acid permease-associated region; KEGG: aha:AHA_2694 aromatic amino acid transport protein AroP. (445 aa) |
| | Sdel_0555 | PFAM: sodium:dicarboxylate symporter; KEGG: abu:Abu_0187 C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (440 aa) |
| | Sdel_0556 | PFAM: sodium:dicarboxylate symporter; KEGG: abu:Abu_0187 C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (442 aa) |
| | mntP | Protein of unknown function DUF204; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. (179 aa) |
| | Sdel_0560 | TIGRFAM: outer membrane insertion C-terminal signal; KEGG: swd:Swoo_0405 hypothetical protein. (206 aa) |
| | Sdel_0594 | PFAM: Citrate transporter; KEGG: ccv:CCV52592_0939 NeuB3. (449 aa) |
| | atpE | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (100 aa) |
| | Sdel_0603 | PFAM: sodium pump decarboxylase gamma subunit; KEGG: sun:SUN_1434 Na+-transporting oxaloacetate decarboxylase, gamma subunit. (81 aa) |
| | Sdel_0605 | Sodium ion-translocating decarboxylase, beta subunit; KEGG: tdn:Suden_1258 pyruvate carboxylase/oxaloacetate decarboxylase biotin carboxyl carrier subunit alpha; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl- CoA/oxaloacetate decarboxylase beta subunit. (436 aa) |
| | Sdel_0617 | PFAM: outer membrane efflux protein; KEGG: tdn:Suden_0879 outer membrane efflux protein. (447 aa) |
| | Sdel_0618 | PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: tdn:Suden_0878 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (268 aa) |
| | Sdel_0619 | KEGG: sun:SUN_0554 acriflavin resistance AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (529 aa) |
| | Sdel_0620 | KEGG: sun:SUN_0555 acriflavin resistance AcrB/AcrD/AcrF family protein. (552 aa) |
| | Sdel_0635 | Cation transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. (479 aa) |
| | Sdel_0636 | PFAM: TrkA-N domain protein; KEGG: nis:NIS_1740 K+ transport system, NAD-binding component. (446 aa) |
| | Sdel_0643 | KEGG: ccv:CCV52592_0479 cell division protein FtsX. (269 aa) |
| | Sdel_0665 | PFAM: protein of unknown function DUF1239; KEGG: ccv:CCV52592_0455 hypothetical protein. (177 aa) |
| | Sdel_0686 | TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sek:SSPA2831 possible membrane transport protein. (478 aa) |
| | Sdel_0690 | PFAM: Hemolysin activator HlyB domain protein; KEGG: tdn:Suden_1007 hemolysin activation/secretion protein-like. (442 aa) |
| | Sdel_0715 | PFAM: outer membrane porin; KEGG: glo:Glov_3627 outer membrane porin. (451 aa) |
| | Sdel_0716 | TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: wsu:WS1426 hypothetical protein. (212 aa) |
| | Sdel_0717 | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: wsu:WS1427 biopolymer transport ExbD protein. (126 aa) |
| | Sdel_0718 | TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: wsu:WS1429 biopolymer transport ExbB protein. (142 aa) |
| | Sdel_0734 | PFAM: outer membrane porin; KEGG: wsu:WS0983 hypothetical protein. (384 aa) |
| | Sdel_0740 | Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (166 aa) |
| | Sdel_0747 | TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like; Citrate transporter; KEGG: msu:MS1553 DcuC protein. (422 aa) |
| | Sdel_0790 | TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: cco:CCC13826_0888 ComEC/Rec2 family protein. (440 aa) |
| | Sdel_0793 | Type I secretion system ATPase; KEGG: cco:CCC13826_0891 hypothetical protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (718 aa) |
| | Sdel_0799 | PFAM: protein of unknown function DUF1212; KEGG: abu:Abu_0319 hypothetical protein. (239 aa) |
| | Sdel_0800 | KEGG: abu:Abu_0318 hypothetical protein. (154 aa) |
| | Sdel_0801 | TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: wsu:WS1121 heavy metal-transporting ATPase. (682 aa) |
| | crcB | CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (129 aa) |
| | Sdel_0815 | PFAM: transport system permease protein; ABC-3 protein; KEGG: dol:Dole_1652 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (346 aa) |
| | Sdel_0823 | PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: tau:Tola_0607 lysine exporter protein (LysE/YggA). (208 aa) |
| | Sdel_0824 | PFAM: protein of unknown function DUF6 transmembrane; KEGG: tau:Tola_1450 protein of unknown function DUF6 transmembrane. (301 aa) |
| | Sdel_0885 | PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sun:SUN_1437 multidrug ABC transporter, ATP- binding protein. (590 aa) |
| | Sdel_0890 | PFAM: Bile acid:sodium symporter; KEGG: ccv:CCV52592_1763 sodium-dependent transporter. (303 aa) |
| | Sdel_0907 | PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: mxa:MXAN_6954 glutathione-regulated potassium- efflux system; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (563 aa) |
| | Sdel_0973 | TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: pha:PSHAa2431 transporter protein. (200 aa) |
| | Sdel_0977 | PFAM: outer membrane efflux protein; KEGG: abu:Abu_0815 outer membrane efflux protein. (410 aa) |
| | Sdel_0978 | KEGG: hhe:HH0223 hypothetical protein. (232 aa) |
| | Sdel_0979 | PFAM: acriflavin resistance protein; KEGG: tdn:Suden_1440 resistance-nodulation-cell division family transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1009 aa) |
| | Sdel_0984 | Type I secretion system ATPase; KEGG: cha:CHAB381_1446 leukotoxin translocation ATP- binding protein LktB; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (700 aa) |
| | Sdel_0985 | PFAM: outer membrane efflux protein; KEGG: cha:CHAB381_1442 outer membrane efflux protein. (435 aa) |
| | murJ | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (469 aa) |
| | Sdel_1055 | PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: cff:CFF8240_0787 lipid export ABC transport protein. (571 aa) |
| | Sdel_1067 | PFAM: sodium:dicarboxylate symporter; KEGG: pmy:Pmen_0129 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (410 aa) |
| | Sdel_1120 | TIGRFAM: outer membrane insertion C-terminal signal; KEGG: spl:Spea_0315 hypothetical protein. (206 aa) |
| | atpB | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (225 aa) |
| | Sdel_1136 | TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: wsu:WS0651 sulfate transporter sulfate transporter family protein. (572 aa) |
| | Sdel_1138 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nis:NIS_0996 oligopeptide ABC transporter, permease. (270 aa) |
| | Sdel_1160 | PFAM: major facilitator superfamily MFS_1; KEGG: mmw:Mmwyl1_1945 major facilitator transporter. (403 aa) |
| | Sdel_1164 | TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: wsu:WS0771 putative outer membrane channel protein. (473 aa) |
| | Sdel_1165 | TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: wsu:WS0770 multidrug resistance protein MexB. (1042 aa) |
| | Sdel_1166 | TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: wsu:WS0768 acriflavin resistance A precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (383 aa) |
| | Sdel_1168 | PFAM: MotA/TolQ/ExbB proton channel; KEGG: hpb:HELPY_0542 chemotaxis protein MotA (motility protein A); putative membrane protein. (258 aa) |
| | zupT | Zinc/iron permease; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily. (281 aa) |
| | Sdel_1177 | PFAM: sodium/hydrogen exchanger; KEGG: tdn:Suden_1944 sodium/hydrogen exchanger. (392 aa) |
| | Sdel_1186 | PFAM: carbon starvation protein CstA; KEGG: stm:STM0600 carbon starvation protein. (707 aa) |
| | Sdel_1194 | PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: nam:NAMH_1060 hydrogenase-4 component I. (138 aa) |
| | Sdel_1196 | PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: nam:NAMH_1058 carbon monoxide-induced hydrogenase, CooU subunit. (164 aa) |
| | Sdel_1197 | NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: nam:NAMH_1057 carbon monoxide-induced hydrogenase, large subunit. (362 aa) |
| | Sdel_1217 | PFAM: OmpA/MotB domain protein; KEGG: ccv:CCV52592_0111 putative chemotaxis protein MotB. (385 aa) |
| | Sdel_1219 | PFAM: protein of unknown function UPF0118; KEGG: abu:Abu_1777 acid membrane antigen A. (355 aa) |
| | Sdel_1224 | PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: dvl:Dvul_0846 TonB-dependent receptor, plug. (908 aa) |
| | Sdel_1264 | PFAM: MscS Mechanosensitive ion channel; KEGG: ccv:CCV52592_1066 mechanosensitive ion channel family protein. (536 aa) |
| | Sdel_1266 | PFAM: TrkA-C domain protein; KEGG: cff:CFF8240_0979 TrkA domain-containing protein. (470 aa) |
| | Sdel_1269 | KEGG: tdn:Suden_1691 Mg2+ transporter protein, CorA- like. (260 aa) |
| | Sdel_1274 | TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; KEGG: abu:Abu_2185 sodium:sulfate symporter family protein. (469 aa) |
| | Sdel_1380 | PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: cff:CFF8240_0767 sodium/hydrogen exchanger family protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (540 aa) |
| | secA | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (859 aa) |
| | nhaA | Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. (391 aa) |
| | Sdel_1413 | KEGG: nis:NIS_1565 hypothetical protein. (266 aa) |
| | Sdel_1436 | KEGG: tdn:Suden_0794 hypothetical protein. (423 aa) |
| | tatB | Twin-arginine translocation protein, TatB subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (147 aa) |
| | tatC | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (253 aa) |
| | Sdel_1459 | PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nis:NIS_0553 TonB-dependent receptor. (647 aa) |
| | Sdel_1462 | Potassium uptake protein, TrkH family; KEGG: abu:Abu_1289 trk system potassium uptake protein TrkB, putative; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter. (443 aa) |
| | Sdel_1463 | PFAM: TrkA-N domain protein; KEGG: wsu:WS1378 putative K+ uptake protein. (220 aa) |
| | Sdel_1480 | PFAM: high-affinity nickel-transporter; KEGG: wsu:WS0271 hypothetical protein; Belongs to the NiCoT transporter (TC 2.A.52) family. (247 aa) |
| | Sdel_1493 | TIGRFAM: ammonium transporter; PFAM: ammonium transporter; KEGG: wsu:WS0410 ammonium transporter. (438 aa) |
| | Sdel_1528 | Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. (419 aa) |
| | Sdel_1542 | PFAM: AzlC family protein; KEGG: wsu:WS1320 hypothetical protein. (224 aa) |
| | Sdel_1548 | KEGG: wsu:WS1577 hypothetical protein. (374 aa) |
| | Sdel_1553 | Small GTP-binding protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (822 aa) |
| | Sdel_1557 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: abu:Abu_1996 ABC transporter, permease protein. (260 aa) |
| | Sdel_1559 | PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: tdn:Suden_1005 TonB-dependent receptor. (706 aa) |
| | Sdel_1561 | PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: wsu:WS1425 outer membrane receptor for iron- regulated colicin I receptor, porin,requires TonB gene product colicin I receptor. (681 aa) |
| | Sdel_1564 | PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: wsu:WS1416 TonB-dependent receptor. (654 aa) |
| | Sdel_1566 | TIGRFAM: TonB family protein; KEGG: tdn:Suden_1004 TonB-like. (251 aa) |
| | Sdel_1568 | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: tdn:Suden_1003 biopolymer transport protein ExbD/TolR. (127 aa) |
| | Sdel_1569 | TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: tdn:Suden_1002 MotA/TolQ/ExbB proton channel. (144 aa) |
| | Sdel_1570 | PFAM: major facilitator superfamily MFS_1; KEGG: abu:Abu_0336 major facilitator superfamily transporter. (394 aa) |
| | Sdel_1571 | PFAM: major facilitator superfamily MFS_1; KEGG: abu:Abu_0337 major facilitator superfamily transporter. (412 aa) |
| | Sdel_1572 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS1265 ABC transporter ATP- binding/permease protein. (591 aa) |
| | Sdel_1573 | PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: wsu:WS1264 ABC transporter ATP-binding protein. (590 aa) |
| | Sdel_1574 | PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: abu:Abu_0340 TonB-dependent receptor protein. (695 aa) |
| | Sdel_1577 | TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: sun:SUN_1147 acetate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (546 aa) |
| | Sdel_1582 | TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: nis:NIS_1052 cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (299 aa) |
| | Sdel_1583 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (698 aa) |
| | corA | Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family. (320 aa) |
| | secF | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (323 aa) |
| | secD | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (522 aa) |
| | Sdel_1679 | Hypothetical protein; KEGG: tdn:Suden_0572 N-terminal methylation. (225 aa) |
| | Sdel_1683 | PFAM: major facilitator superfamily MFS_1; KEGG: cff:CFF8240_0581 putative transport protein. (380 aa) |
| | Sdel_1685 | PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cco:CCC13826_1484 inner membrane protein YicO. (429 aa) |
| | Sdel_1713 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asu:Asuc_0320 maltose/maltodextrin transporter ATP-binding protein. (219 aa) |
| | Sdel_1717 | Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (232 aa) |
| | Sdel_1724 | PFAM: protein of unknown function DUF214; KEGG: mei:Msip34_1219 protein of unknown function DUF214. (406 aa) |
| | Sdel_1726 | TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mei:Msip34_1221 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (395 aa) |
| | Sdel_1727 | Type I secretion outer membrane protein, TolC family; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. (452 aa) |
| | Sdel_1730 | PFAM: MscS Mechanosensitive ion channel; KEGG: sbm:Shew185_0463 MscS mechanosensitive ion channel. (276 aa) |
| | Sdel_1739 | TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: ppd:Ppro_3226 ATPase, P-type (transporting), HAD superfamily, subfamily IC. (900 aa) |
| | Sdel_1742 | KEGG: abu:Abu_1445 hypothetical protein. (824 aa) |
| | Sdel_1751 | PFAM: protein of unknown function DUF6 transmembrane; Nucleotide-sugar transporter; KEGG: tdn:Suden_0400 hypothetical protein. (297 aa) |
| | Sdel_1819 | TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: sun:SUN_1930 heavy-metal transporting P-type ATPase. (806 aa) |
| | Sdel_1831 | Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (168 aa) |
| | Sdel_1844 | KEGG: sse:Ssed_3830 extracellular solute-binding protein. (260 aa) |
| | Sdel_1845 | KEGG: sse:Ssed_3830 extracellular solute-binding protein. (262 aa) |
| | Sdel_1850 | PFAM: phosphate transporter; KEGG: nis:NIS_0568 inorganic phosphate transporter. (535 aa) |
| | pstB | Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (273 aa) |
| | Sdel_1857 | TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS0946 phosphate ABC transporter permease. (389 aa) |
| | Sdel_1858 | Phosphate ABC transporter, inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (418 aa) |
| | Sdel_1862 | PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: wsu:WS1842 hydrogenase 4 membrane subunit. (646 aa) |
| | Sdel_1865 | PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: wsu:WS1839 hydrogenase 4 membrane subunit. (489 aa) |
| | Sdel_1866 | PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: wsu:WS1838 hydrogenase 4 subunit. (579 aa) |
| | Sdel_1868 | PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: wsu:WS1836 hydrogenase-Ni,Fe-hydrogenase III small subunit. (274 aa) |
| | Sdel_1884 | TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: yen:YE0445 outer membrane efflux lipoprotein. (464 aa) |
| | Sdel_1885 | TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mmw:Mmwyl1_0997 hydrophobe/amphiphile efflux- 1 (HAE1) family protein. (1041 aa) |
| | Sdel_1886 | TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ypi:YpsIP31758_3586 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (379 aa) |
| | sstT | Sodium:dicarboxylate symporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (401 aa) |
| | Sdel_1891 | PFAM: Na+/Picotransporter; KEGG: sun:SUN_1122 phosphate:Na+ symporter. (607 aa) |
| | Sdel_1901 | PFAM: OmpA/MotB domain protein; KEGG: ccv:CCV52592_0913 outer membrane fibronectin- binding protein. (335 aa) |
| | Sdel_1919 | KEGG: cla:Cla_0374 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (488 aa) |
| | secY | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (420 aa) |
| | Sdel_1973 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (718 aa) |
| | Sdel_2007 | Anaerobic c4-dicarboxylate antiporter, Dcu family; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family. (433 aa) |
| | Sdel_2034 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS0981 oligopeptide ABC transporter permease. (309 aa) |
| | Sdel_2035 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmr:PMI2945 ABC transporter, permease protein. (277 aa) |
| | Sdel_2041 | PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ppr:PBPRA2051 putative homoserine/homoserine lactoneefflux protein. (207 aa) |
| | Sdel_2043 | PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: csa:Csal_2500 lysine exporter protein LysE/YggA. (208 aa) |
| | Sdel_2047 | PFAM: high-affinity nickel-transporter; KEGG: ppd:Ppro_3677 high-affinity nickel- transporter; Belongs to the NiCoT transporter (TC 2.A.52) family. (249 aa) |
| | Sdel_2052 | PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: tdn:Suden_0767 C4-dicarboxylate transporter/malic acid transport protein. (322 aa) |
| | Sdel_2056 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nam:NAMH_1313 sulfate/molybdate ABC transporter, permease protein. (256 aa) |
| | Sdel_2057 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nam:NAMH_1311 sulfate/thiosulfate import ATP- binding protein CysA. (327 aa) |
| | Sdel_2061 | PFAM: TonB-dependent receptor; KEGG: pca:Pcar_0160 outer membrane receptor protein. (742 aa) |
| | Sdel_2064 | PFAM: transport system permease protein; KEGG: ppd:Ppro_1462 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (338 aa) |
| | Sdel_2065 | TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: tdn:Suden_1544 TonB-like. (201 aa) |
| | Sdel_2066 | PFAM: Biopolymer transport protein ExbD/TolR; KEGG: tdn:Suden_1543 biopolymer transport protein ExbD/TolR. (135 aa) |
| | Sdel_2067 | PFAM: MotA/TolQ/ExbB proton channel; KEGG: tdn:Suden_1542 MotA/TolQ/ExbB proton channel. (148 aa) |
| | Sdel_2087 | PFAM: outer membrane porin; KEGG: glo:Glov_3627 outer membrane porin. (452 aa) |
| | Sdel_2108 | PFAM: ABC-2 type transporter; KEGG: dar:Daro_2372 hypothetical protein. (386 aa) |
| | Sdel_2146 | PFAM: major facilitator superfamily MFS_1; KEGG: abu:Abu_0585 major facilitator superfamily transporter. (438 aa) |
| | Sdel_2155 | Flagellar protein export ATPase FliI; KEGG: ccv:CCV52592_1495 flagellum-specific ATP synthase; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase. (434 aa) |
| | Sdel_2167 | PFAM: TrkA-N domain protein; KEGG: nis:NIS_0858 potassium channel protein. (232 aa) |
| | Sdel_2168 | PFAM: TrkA-N domain protein; Ion transport 2 domain protein; Ion transport protein; TrkA-C domain protein; KEGG: nam:NAMH_1090 TrkA-N:ion transport protein. (531 aa) |
| | Sdel_2175 | PFAM: protein of unknown function DUF6 transmembrane; KEGG: cco:CCC13826_0684 hypothetical protein. (289 aa) |
| | Sdel_2191 | PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: maq:Maqu_3521 multi anti extrusion protein MatE. (446 aa) |
| | Sdel_2247 | TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: wsu:WS1301 putative sodium/alanine symporter. (443 aa) |
| | Sdel_2248 | TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: wsu:WS0203 uracil permease. (421 aa) |
| | Sdel_2278 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (112 aa) |
