STRINGSTRING
Sdel_2289 Sdel_2289 fliQ fliQ Sdel_2210 Sdel_2210 Sdel_1926 Sdel_1926 Sdel_1925 Sdel_1925 Sdel_1140 Sdel_1140 Sdel_1142 Sdel_1142 Sdel_1148 Sdel_1148 flhA flhA Sdel_0073 Sdel_0073 csrA csrA flhB flhB Sdel_0293 Sdel_0293 Sdel_0294 Sdel_0294 fliW fliW Sdel_0539 Sdel_0539 Sdel_0409 Sdel_0409 Sdel_1139 Sdel_1139 Sdel_0334 Sdel_0334 fliP fliP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_2289Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. (229 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (88 aa)
Sdel_2210TIGRFAM: pseudaminic acid CMP-transferase; PFAM: acylneuraminate cytidylyltransferase; KEGG: abu:Abu_2245 acylneuraminate cytidylyltransferase. (232 aa)
Sdel_1926KEGG: nam:NAMH_1681 hypothetical protein. (144 aa)
Sdel_1925KEGG: wsu:WS2054 hypothetical protein. (175 aa)
Sdel_1140KEGG: wsu:WS0260 hypothetical protein. (142 aa)
Sdel_1142KEGG: cff:CFF8240_0097 hypothetical protein. (98 aa)
Sdel_1148TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: hhe:HH0791 flagellar protein FliS. (125 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (730 aa)
Sdel_0073PFAM: Mannosyl-glycoprotein endo-beta-N- acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: cff:CFF8240_1770 mannosyl-glycoprotein endo- beta-N-acetylglucosamidase domain-containing protein. (239 aa)
csrACarbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (75 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (353 aa)
Sdel_0293KEGG: cco:CCC13826_0367 flagellar biosynthesis regulator FlhF; TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase. (423 aa)
Sdel_0294PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ccv:CCV52592_0368 ParaA family ATPase. (290 aa)
fliWProtein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (130 aa)
Sdel_0539KEGG: cco:CCC13826_0976 hypothetical protein. (290 aa)
Sdel_0409Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (257 aa)
Sdel_1139TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: cff:CFF8240_0100 flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. (614 aa)
Sdel_0334KEGG: bch:Bcen2424_0454 phage protein. (524 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (238 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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