STRINGSTRING
Sdel_0013 Sdel_0013 Sdel_0132 Sdel_0132 fur fur Sdel_0284 Sdel_0284 Sdel_0296 Sdel_0296 nusG nusG fur-2 fur-2 nusA nusA Sdel_0544 Sdel_0544 fur-3 fur-3 Sdel_0802 Sdel_0802 Sdel_0810 Sdel_0810 Sdel_0918 Sdel_0918 Sdel_0952 Sdel_0952 Sdel_1022 Sdel_1022 Sdel_1070 Sdel_1070 Sdel_1100 Sdel_1100 Sdel_1163 Sdel_1163 Sdel_1167 Sdel_1167 Sdel_1225 Sdel_1225 Sdel_1226 Sdel_1226 Sdel_1260 Sdel_1260 Sdel_1500 Sdel_1500 Sdel_1527 Sdel_1527 rpoD rpoD Sdel_1575 Sdel_1575 Sdel_1634 Sdel_1634 Sdel_1641 Sdel_1641 Sdel_1718 Sdel_1718 Sdel_1731 Sdel_1731 Sdel_1980 Sdel_1980 Sdel_2059 Sdel_2059 Sdel_2068 Sdel_2068 Sdel_2134 Sdel_2134 Sdel_2254 Sdel_2254
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_0013PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: wsu:WS1533 transcriptional regulator. (218 aa)
Sdel_0132PFAM: ferric-uptake regulator; KEGG: abu:Abu_1740 FUR family transcriptional regulator; Belongs to the Fur family. (123 aa)
furPFAM: ferric-uptake regulator; KEGG: ccv:CCV52592_1672 FUR family transcriptional regulator; Belongs to the Fur family. (139 aa)
Sdel_0284PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nam:NAMH_0761 transcriptional regulator. (294 aa)
Sdel_0296TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ccv:CCV52592_0370 flagellar biosynthesis sigma factor. (237 aa)
nusGTranscription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination. (176 aa)
fur-2PFAM: ferric-uptake regulator; KEGG: wsu:WS0545 peroxide stress regulator; Belongs to the Fur family. (136 aa)
nusATranscription termination factor NusA; Participates in both transcription termination and antitermination. (374 aa)
Sdel_0544PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: gem:GM21_0359 transcriptional regulator, MarR family. (144 aa)
fur-3PFAM: ferric-uptake regulator; KEGG: cco:CCC13826_0224 putative iron-regulated membrane protein; Belongs to the Fur family. (156 aa)
Sdel_0802PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: wsu:WS1120 putative transcriptional regulator. (125 aa)
Sdel_0810PFAM: regulatory protein LysR; TOBE domain protein; KEGG: abu:Abu_0013 molybdenum-binding protein. (260 aa)
Sdel_0918KEGG: cla:Cla_0872 conserved hypothetical protein, putative transcriptional regulator. (307 aa)
Sdel_0952KEGG: sun:SUN_2302 transcriptional regulator. (304 aa)
Sdel_1022RNA polymerase sigma-54 factor, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (423 aa)
Sdel_1070PFAM: helix-turn-helix HxlR type; KEGG: abu:Abu_1057 hypothetical protein. (128 aa)
Sdel_1100NikR nickel binding protein; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. (137 aa)
Sdel_1163PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: ccv:CCV52592_0526 AraC family transcriptional regulator. (300 aa)
Sdel_1167PFAM: regulatory protein TetR; KEGG: wsu:WS0767 transcription regulator protein. (220 aa)
Sdel_1225PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family. (319 aa)
Sdel_1226TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: abu:Abu_1430 ECF subfamily RNA polymerase sigma factor. (155 aa)
Sdel_1260SMART: Helix-turn-helix, AraC domain; KEGG: wsu:WS0114 putative transcriptional regulator. (339 aa)
Sdel_1500KEGG: noc:Noc_0060 ATP-binding region, ATPase-like. (291 aa)
Sdel_1527PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: abu:Abu_1932 ArsR family transcriptional regulator. (104 aa)
rpoDRNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (617 aa)
Sdel_1575PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: ccv:CCV52592_1805 AraC family transcriptional regulator. (325 aa)
Sdel_1634PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: tdn:Suden_0436 LysR family transcriptional regulator. (307 aa)
Sdel_1641PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: wsu:WS0785 hypothetical protein. (287 aa)
Sdel_1718PFAM: TOBE domain protein; KEGG: sun:SUN_2104 hypothetical protein. (133 aa)
Sdel_1731Hypothetical protein; KEGG: wsu:WS1376 CheY and CheB genes (chemotaxis protein). (477 aa)
Sdel_1980PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: abu:Abu_1358 response regulator receiver domain-containing protein. (126 aa)
Sdel_2059PFAM: regulatory protein LysR; KEGG: cco:CCC13826_0212 CBS domain-containing protein. (245 aa)
Sdel_2068PFAM: TOBE domain protein; regulatory protein LysR; KEGG: wsu:WS1811 molybdenum-pterin-binding protein. (257 aa)
Sdel_2134KEGG: sun:SUN_0708 hypothetical protein. (109 aa)
Sdel_2254methylated-DNA/protein- cysteinemethyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (151 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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