Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Sdel_0218 | Sdel_0219 | Sdel_0218 | Sdel_0219 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: cla:Cla_1357 flagellar motor switch protein FliG. | 0.999 |
| Sdel_0218 | Sdel_0297 | Sdel_0218 | Sdel_0297 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: ccv:CCV52592_1439 flagellar motor switch protein FliM. | 0.974 |
| Sdel_0218 | Sdel_0298 | Sdel_0218 | Sdel_0298 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: cco:CCC13826_1019 flagellar motor switch protein FliY. | 0.990 |
| Sdel_0218 | Sdel_0409 | Sdel_0218 | Sdel_0409 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.959 |
| Sdel_0218 | Sdel_0539 | Sdel_0218 | Sdel_0539 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | KEGG: cco:CCC13826_0976 hypothetical protein. | 0.918 |
| Sdel_0218 | Sdel_0879 | Sdel_0218 | Sdel_0879 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.973 |
| Sdel_0218 | Sdel_1544 | Sdel_0218 | Sdel_1544 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: wsu:WS1802 flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | 0.992 |
| Sdel_0218 | Sdel_1545 | Sdel_0218 | Sdel_1545 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; KEGG: cco:CCC13826_2185 flagellar basal-body rod protein. | 0.956 |
| Sdel_0218 | Sdel_1674 | Sdel_0218 | Sdel_1674 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.991 |
| Sdel_0218 | Sdel_1981 | Sdel_0218 | Sdel_1981 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | KEGG: dps:DP1553 hypothetical protein. | 0.532 |
| Sdel_0218 | Sdel_2289 | Sdel_0218 | Sdel_2289 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.991 |
| Sdel_0218 | Sdel_2290 | Sdel_0218 | Sdel_2290 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: ccv:CCV52592_2049 hypothetical protein. | 0.946 |
| Sdel_0218 | Sdel_2291 | Sdel_0218 | Sdel_2291 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | TIGRFAM: flagellar hook protein FlgE; fagellar hook- basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ccv:CCV52592_2040 flagellar hook protein FlgE. | 0.999 |
| Sdel_0218 | flgH | Sdel_0218 | Sdel_1042 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.992 |
| Sdel_0218 | flgI | Sdel_0218 | Sdel_1143 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.992 |
| Sdel_0218 | flhB | Sdel_0218 | Sdel_0240 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. | 0.956 |
| Sdel_0218 | fliE | Sdel_0218 | Sdel_1672 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: ccv:CCV52592_0691 flagellar hook-basal body protein FliE. | 0.975 |
| Sdel_0218 | fliP | Sdel_0218 | Sdel_1122 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.992 |
| Sdel_0218 | fliQ | Sdel_0218 | Sdel_2238 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. | 0.990 |
| Sdel_0219 | Sdel_0218 | Sdel_0219 | Sdel_0218 | TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: cla:Cla_1357 flagellar motor switch protein FliG. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.999 |
page 1 of 19