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| | Sdel_2166 | SMART: AAA ATPase; KEGG: cco:CCC13826_0805 3-dehydroquinate dehydratase (3-dehydroquinase; type IIDHQase). (413 aa) |
| | Sdel_1055 | PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: cff:CFF8240_0787 lipid export ABC transport protein. (571 aa) |
| | Sdel_1170 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sun:SUN_1816 ABC transporter, ATP-binding protein. (610 aa) |
| | Sdel_1222 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0445 ATPase. (297 aa) |
| | Sdel_1262 | PFAM: AAA ATPase central domain protein; peptidase M41; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ccv:CCV52592_1068 putative cell division protease FtsH-like protein; Belongs to the AAA ATPase family. (553 aa) |
| | Sdel_1313 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nis:NIS_0866 oligopeptide ABC transporter, ATP-binding protein. (193 aa) |
| | Sdel_1400 | PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: nis:NIS_0876 ATP-dependent Clp protease, ATP- binding subunit ClpB; Belongs to the ClpA/ClpB family. (856 aa) |
| | Sdel_1413 | KEGG: nis:NIS_1565 hypothetical protein. (266 aa) |
| | Sdel_1433 | PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: nis:NIS_1038 ABC transport system ATP-binding protein. (649 aa) |
| | Sdel_1526 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: abu:Abu_1039 ABC transporter, ATP-binding protein. (266 aa) |
| | Sdel_1556 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tdn:Suden_1348 ABC transporter-related protein. (245 aa) |
| | Sdel_1572 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS1265 ABC transporter ATP- binding/permease protein. (591 aa) |
| | Sdel_1573 | PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: wsu:WS1264 ABC transporter ATP-binding protein. (590 aa) |
| | Sdel_1626 | KEGG: nis:NIS_0380 ATP-dependent Clp protease, ATP- binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Belongs to the ClpA/ClpB family. (732 aa) |
| | Sdel_1650 | KEGG: cco:CCC13826_1434 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase. (446 aa) |
| | Sdel_1663 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nis:NIS_1522 ABC transporter, ATP-binding protein. (231 aa) |
| | Sdel_1696 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sun:SUN_1475 ABC transporter, ATP-binding protein. (531 aa) |
| | Sdel_1713 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asu:Asuc_0320 maltose/maltodextrin transporter ATP-binding protein. (219 aa) |
| | Sdel_1716 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sun:SUN_2102 molybdenum ABC transporter, ATP- binding protein. (286 aa) |
| | Sdel_1725 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mei:Msip34_1220 ABC transporter related. (236 aa) |
| | ftsH | ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (643 aa) |
| | Sdel_1841 | PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase; KEGG: nis:NIS_1070 hypothetical protein. (806 aa) |
| | pstB | Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (273 aa) |
| | Sdel_2019 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tau:Tola_1246 ABC transporter related. (228 aa) |
| | Sdel_2057 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nam:NAMH_1311 sulfate/thiosulfate import ATP- binding protein CysA. (327 aa) |
| | Sdel_2063 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_1463 ABC transporter related. (260 aa) |
| | Sdel_2107 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_2371 ABC transporter related. (287 aa) |
| | Sdel_2155 | Flagellar protein export ATPase FliI; KEGG: ccv:CCV52592_1495 flagellum-specific ATP synthase; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase. (434 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (441 aa) |
| | Sdel_0023 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS0987 putative oligopeptide transporter. (272 aa) |
| | Sdel_0024 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS0988 oligopeptide ABC transporter ATP- binding protein. (254 aa) |
| | Sdel_0032 | PFAM: SMC domain protein; SMART: AAA ATPase; KEGG: psb:Psyr_0419 hypothetical protein. (440 aa) |
| | Sdel_0066 | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: cco:CCC13826_1825 recombination factor protein RarA. (396 aa) |
| | recA | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (347 aa) |
| | Sdel_0101 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS2022 ABC transporter ATP-binding protein. (244 aa) |
| | Sdel_0125 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS0277 amino acid permease ATP-binding protein. (246 aa) |
| | Sdel_0130 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cco:CCC13826_1791 ATP-dependent DNA helicase PcrA. (253 aa) |
| | Sdel_0137 | PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: nis:NIS_0287 AAA family ATPase. (577 aa) |
| | clpX | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (412 aa) |
| | Sdel_0210 | KEGG: cha:CHAB381_1305 twitching mobility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase. (399 aa) |
| | Sdel_0293 | KEGG: cco:CCC13826_0367 flagellar biosynthesis regulator FlhF; TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase. (423 aa) |
| | Sdel_0320 | PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: ccv:CCV52592_1462 putative alkyl- dihydroxyacetone phosphate synthase. (385 aa) |
| | metN | ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (319 aa) |
| | ruvB | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (340 aa) |
| | Sdel_0408 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nis:NIS_1535 ABC transporter, ATP-binding protein. (214 aa) |
| | gmk | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. (204 aa) |
| | dnaX | DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (546 aa) |
| | rho | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (447 aa) |
| | Sdel_0478 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cla:Cla_1114 branched-chain amino acid ABC transporter, ATP-binding protein. (255 aa) |
| | Sdel_0479 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cju:C8J_0951 high affinity branched-chain amino acid ABC transporter, ATP-binding protein. (231 aa) |
| | atpD | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (465 aa) |
| | Sdel_0554 | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (938 aa) |
| | Sdel_0580 | Twitching motility protein; KEGG: ccv:CCV52592_0998 putative type II/IV secretion system protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase. (355 aa) |
| | Sdel_0642 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS0146 cell division protein FtsE. (223 aa) |
| | Sdel_0658 | SMC domain protein; May be involved in recombinational repair of damaged DNA. (513 aa) |
| | Sdel_0694 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS0390 ABC transporter ATPase. (225 aa) |
| | Sdel_0785 | SMART: AAA ATPase; KEGG: sun:SUN_0582 hypothetical protein. (399 aa) |
| | Sdel_0793 | Type I secretion system ATPase; KEGG: cco:CCC13826_0891 hypothetical protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (718 aa) |
| | Sdel_0814 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dds:Ddes_0989 ABC transporter related. (260 aa) |
| | lon | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (807 aa) |
| | radA | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (450 aa) |
| | ftsY | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (294 aa) |
| | Sdel_0885 | PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sun:SUN_1437 multidrug ABC transporter, ATP- binding protein. (590 aa) |
| | Sdel_0923 | PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gme:Gmet_3281 transposase/IS protein. (273 aa) |
| | Sdel_0969 | PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; KEGG: cff:CFF8240_0684 DNA translocase FtsK. (709 aa) |
| | Sdel_0984 | Type I secretion system ATPase; KEGG: cha:CHAB381_1446 leukotoxin translocation ATP- binding protein LktB; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (700 aa) |
| | Sdel_1004 | PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gsu:GSU2594 transposase/IS protein. (272 aa) |
| | Sdel_2172 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tdn:Suden_1315 ABC transporter-related protein. (222 aa) |
| | Sdel_1023 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cco:CCC13826_1239 ABC-transporter ATP-binding protein. (240 aa) |
| | Sdel_1031 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. (441 aa) |
| | Sdel_1037 | SMART: AAA ATPase; KEGG: cha:CHAB381_1055 hypothetical protein. (269 aa) |
| | Sdel_1039 | PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: cco:CCC13826_1231 L(+)-tartrate dehydratase subunit beta (L-TTD beta). (583 aa) |
