STRINGSTRING
Sdel_1139 Sdel_1139 Sdel_1455 Sdel_1455 Sdel_1544 Sdel_1544 Sdel_1545 Sdel_1545 Sdel_1673 Sdel_1673 Sdel_2290 Sdel_2290 Sdel_2291 Sdel_2291
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_1139TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: cff:CFF8240_0100 flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. (614 aa)
Sdel_1455PFAM: protein of unknown function DUF1078 domain protein; KEGG: wsu:WS1332 hypothetical protein. (93 aa)
Sdel_1544TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: wsu:WS1802 flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family. (262 aa)
Sdel_1545TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; KEGG: cco:CCC13826_2185 flagellar basal-body rod protein. (267 aa)
Sdel_1673TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: cla:Cla_1066 flagellar proximal rod protein FlgC; Belongs to the flagella basal body rod proteins family. (163 aa)
Sdel_2290TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: ccv:CCV52592_2049 hypothetical protein. (567 aa)
Sdel_2291TIGRFAM: flagellar hook protein FlgE; fagellar hook- basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ccv:CCV52592_2040 flagellar hook protein FlgE. (851 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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