STRINGSTRING
Sdel_1301 Sdel_1301 Sdel_2072 Sdel_2072 Sdel_1104 Sdel_1104 Sdel_0808 Sdel_0808
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_1301PFAM: Dihaem cytochrome c; cytochrome B561; KEGG: cff:CFF8240_0453 nickel-dependent hydrogenases B-type cytochrome subunit family protein. (387 aa)
Sdel_2072TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: cjd:JJD26997_1861 formate dehydrogenase, cytochrome b subunit. (299 aa)
Sdel_1104TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: cla:Cla_0714 Ni/Fe hydrogenase, cytochrome b subunit. (225 aa)
Sdel_0808TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: dps:DP2988 formate dehydrogenase, gamma subunit. (299 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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