STRINGSTRING
Sdel_1571 Sdel_1571 Sdel_1683 Sdel_1683 Sdel_2146 Sdel_2146 Sdel_2184 Sdel_2184 Sdel_0012 Sdel_0012 Sdel_0111 Sdel_0111 ndk ndk Sdel_0251 Sdel_0251 Sdel_0276 Sdel_0276 Sdel_0388 Sdel_0388 Sdel_1160 Sdel_1160 Sdel_1570 Sdel_1570
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_1571PFAM: major facilitator superfamily MFS_1; KEGG: abu:Abu_0337 major facilitator superfamily transporter. (412 aa)
Sdel_1683PFAM: major facilitator superfamily MFS_1; KEGG: cff:CFF8240_0581 putative transport protein. (380 aa)
Sdel_2146PFAM: major facilitator superfamily MFS_1; KEGG: abu:Abu_0585 major facilitator superfamily transporter. (438 aa)
Sdel_2184PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: abu:Abu_1935 arsenate reductase. (133 aa)
Sdel_0012TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: csa:Csal_1475 Bcr/CflA subfamily drug resistance transporter. (395 aa)
Sdel_0111PFAM: major facilitator superfamily MFS_1; KEGG: ccv:CCV52592_1627 major facilitator transporter. (396 aa)
ndkNucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (137 aa)
Sdel_0251TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: nis:NIS_0424 riboflavin biosynthesis protein RibG. (338 aa)
Sdel_0276KEGG: scl:sce8829 hypothetical protein. (103 aa)
Sdel_0388PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4309 sugar efflux transporter. (390 aa)
Sdel_1160PFAM: major facilitator superfamily MFS_1; KEGG: mmw:Mmwyl1_1945 major facilitator transporter. (403 aa)
Sdel_1570PFAM: major facilitator superfamily MFS_1; KEGG: abu:Abu_0336 major facilitator superfamily transporter. (394 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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