STRINGSTRING
Sdel_0048 Sdel_0048 Sdel_0053 Sdel_0053 Sdel_0055 Sdel_0055 purF purF carB carB pyrB pyrB Sdel_0441 Sdel_0441 Sdel_0529 Sdel_0529 Sdel_0530 Sdel_0530 Sdel_0593 Sdel_0593 argH argH argG argG Sdel_1178 Sdel_1178 Sdel_1200 Sdel_1200 Sdel_1291 Sdel_1291 Sdel_1292 Sdel_1292 purQ purQ Sdel_1474 Sdel_1474 Sdel_1661 Sdel_1661 glmS glmS carA carA purA purA Sdel_2006 Sdel_2006 Sdel_2008 Sdel_2008 Sdel_2009 Sdel_2009 Sdel_2189 Sdel_2189 Sdel_2216 Sdel_2216
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_0048PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: abu:Abu_1765 putative nitrilase/cyanide hydratase. (246 aa)
Sdel_0053TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: cff:CFF8240_1412 aspartate racemase; Belongs to the aspartate/glutamate racemases family. (233 aa)
Sdel_0055TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; KEGG: wsu:WS0416 adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (442 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (445 aa)
carBTIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; MGS domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl- phosphate synthetase large chain domain protein; KEGG: ccv:CCV52592_0870 carbamoyl phosphate synthase large subunit; Belongs to the CarB family. (1085 aa)
pyrBKEGG: cha:CHAB381_0964 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (312 aa)
Sdel_0441PFAM: Asparaginase/glutaminase; KEGG: abu:Abu_1580 putative asparaginase. (164 aa)
Sdel_0529PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: nis:NIS_1201 glutamate synthase (NADPH), large chain. (1474 aa)
Sdel_0530TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tdn:Suden_1175 glutamate synthase subunit beta. (461 aa)
Sdel_0593L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (485 aa)
argHTIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: tdn:Suden_0866 argininosuccinate lyase. (463 aa)
argGKEGG: cco:CCC13826_1219 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (409 aa)
Sdel_1178L-asparaginase, type II; KEGG: cff:CFF8240_1025 L-asparaginase II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; Belongs to the asparaginase 1 family. (347 aa)
Sdel_1200PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nam:NAMH_1054 glutamate synthase [NADPH] small chain. (473 aa)
Sdel_1291PFAM: aminotransferase class I and II; KEGG: nis:NIS_0815 aspartate aminotransferase. (389 aa)
Sdel_1292PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pca:Pcar_2295 putative oxidoreductase. (398 aa)
purQPhosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...] (223 aa)
Sdel_1474PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: sfu:Sfum_1311 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (784 aa)
Sdel_1661TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: cff:CFF8240_1054 glutamine synthetase, type I. (476 aa)
glmSGlucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (603 aa)
carATIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl- phosphate synthase small chain; KEGG: sun:SUN_0176 carbamoyl phosphate synthase small subunit; Belongs to the CarA family. (376 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (415 aa)
Sdel_2006L-asparaginase, type II; KEGG: wsu:WS0660 periplasmic L-asparaginase II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; Belongs to the asparaginase 1 family. (348 aa)
Sdel_2008TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; KEGG: wsu:WS0662 aspartate ammonia-lyase. (468 aa)
Sdel_2009TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; KEGG: wsu:WS0662 aspartate ammonia-lyase. (476 aa)
Sdel_2189Glutamate dehydrogenase (NADP(+)); PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: sun:SUN_1928 glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (451 aa)
Sdel_2216TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; KEGG: tdn:Suden_0186 asparagine synthase, glutamine- hydrolyzing. (596 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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