STRINGSTRING
Sdel_0039 Sdel_0039 Sdel_0091 Sdel_0091 Sdel_0385 Sdel_0385 glyA glyA Sdel_0805 Sdel_0805 Sdel_0806 Sdel_0806 Sdel_0807 Sdel_0807 Sdel_0808 Sdel_0808 Sdel_0970 Sdel_0970 mdh mdh Sdel_1092 Sdel_1092 purU purU acsA acsA Sdel_1592 Sdel_1592 Sdel_1661 Sdel_1661 Sdel_1899 Sdel_1899 Sdel_1932 Sdel_1932 Sdel_2072 Sdel_2072 Sdel_2073 Sdel_2073 Sdel_2074 Sdel_2074 Sdel_2232 Sdel_2232 Sdel_2253 Sdel_2253
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sdel_0039PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: tdn:Suden_1902 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (694 aa)
Sdel_0091PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ccv:CCV52592_1540 glycerate dehydrogenase. (310 aa)
Sdel_0385PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: cha:CHAB381_1616 iron-sulfur cluster-binding domain-containing protein. (420 aa)
glyAGlycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (415 aa)
Sdel_0805PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: tdn:Suden_0820 formate dehydrogenase alpha subunit. (186 aa)
Sdel_0806PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: cco:CCC13826_0208 fumarate hydratase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (749 aa)
Sdel_0807PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nam:NAMH_1308 formate dehydrogenase subunit B. (199 aa)
Sdel_0808TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: dps:DP2988 formate dehydrogenase, gamma subunit. (299 aa)
Sdel_0970TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B, N-terminal; aconitate hydratase domain protein; KEGG: nis:NIS_0828 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Belongs to the aconitase/IPM isomerase family. (853 aa)
mdhMalate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (316 aa)
Sdel_1092TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nis:NIS_1852 HAD-superfamily hydrolase. (212 aa)
purUFormyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (280 aa)
acsAacetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (648 aa)
Sdel_1592D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: cha:CHAB381_1615 glycolate oxidase, subunit GlcD. (459 aa)
Sdel_1661TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: cff:CFF8240_1054 glutamine synthetase, type I. (476 aa)
Sdel_1899TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sun:SUN_0197 HAD-superfamily hydrolase. (212 aa)
Sdel_1932TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dal:Dalk_1233 HAD-superfamily hydrolase, subfamily IA, variant 1. (218 aa)
Sdel_2072TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: cjd:JJD26997_1861 formate dehydrogenase, cytochrome b subunit. (299 aa)
Sdel_2073PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_0209 cytoplasmic membrane protein. (210 aa)
Sdel_2074PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dps:DP2986 formate dehydrogenase, chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (749 aa)
Sdel_2232KEGG: cco:CCC13826_2287 citrate (Si)-synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family. (428 aa)
Sdel_2253KEGG: glycerate kinase; K00865 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family. (380 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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