STRINGSTRING
Sdel_0039 Sdel_0039 Sdel_0091 Sdel_0091 Sdel_0208 Sdel_0208 tal tal prs prs Sdel_0394 Sdel_0394 Sdel_0395 Sdel_0395 Sdel_0396 Sdel_0396 Sdel_0421 Sdel_0421 pgk pgk Sdel_0423 Sdel_0423 Sdel_0497 Sdel_0497 Sdel_0501 Sdel_0501 accD accD glyA glyA Sdel_0604 Sdel_0604 pckA pckA Sdel_0615 Sdel_0615 fbp fbp Sdel_0805 Sdel_0805 Sdel_0806 Sdel_0806 Sdel_0807 Sdel_0807 Sdel_0808 Sdel_0808 Sdel_0813 Sdel_0813 Sdel_0842 Sdel_0842 folD folD Sdel_0970 Sdel_0970 Sdel_0972 Sdel_0972 Sdel_1014 Sdel_1014 ackA ackA Sdel_1045 Sdel_1045 Sdel_1081 Sdel_1081 Sdel_1082 Sdel_1082 Sdel_1083 Sdel_1083 Sdel_1084 Sdel_1084 sucD sucD sucC sucC mdh mdh Sdel_1089 Sdel_1089 pgi pgi Sdel_1184 Sdel_1184 Sdel_1201 Sdel_1201 Sdel_1275 Sdel_1275 Sdel_1276 Sdel_1276 Sdel_1290 Sdel_1290 Sdel_1332 Sdel_1332 Sdel_1339 Sdel_1339 acsA acsA Sdel_1607 Sdel_1607 Sdel_1699 Sdel_1699 accA accA gpmI gpmI Sdel_1847 Sdel_1847 Sdel_1898 Sdel_1898 Sdel_1933 Sdel_1933 Sdel_2072 Sdel_2072 Sdel_2073 Sdel_2073 Sdel_2074 Sdel_2074 Sdel_2195 Sdel_2195 Sdel_2198 Sdel_2198 Sdel_2199 Sdel_2199 Sdel_2232 Sdel_2232 eno eno
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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Sdel_0039PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: tdn:Suden_1902 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (694 aa)
Sdel_0091PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ccv:CCV52592_1540 glycerate dehydrogenase. (310 aa)
Sdel_0208KEGG: abu:Abu_0221 3-phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD- superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase. (206 aa)
talTransaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. (331 aa)
prsRibose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (309 aa)
Sdel_0394PFAM: Fumarate reductase respiratory complex; KEGG: abu:Abu_0301 fumarate reductase cytochrome b- 556 subunit. (260 aa)
Sdel_0395KEGG: ccv:CCV52592_2205 fumarate reductase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (661 aa)
Sdel_0396TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_0424 fumarate reductase iron- sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (240 aa)
Sdel_0421KEGG: tdn:Suden_1754 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (333 aa)
pgkPFAM: phosphoglycerate kinase; KEGG: cjr:CJE1589 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (399 aa)
Sdel_0423PFAM: triosephosphate isomerase; KEGG: abu:Abu_2134 triosephosphate isomerase. (237 aa)
Sdel_0497Malate dehydrogenase (acceptor); PFAM: FAD dependent oxidoreductase; Malate:quinone- oxidoreductase; KEGG: sun:SUN_0432 malate:quinone oxidoreductase. (446 aa)
Sdel_0501Pyruvate kinase; KEGG: cff:CFF8240_0630 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family. (481 aa)
accDacetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (292 aa)
glyAGlycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (415 aa)
Sdel_0604PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; KEGG: cco:CCC13826_1508 glyceraldehyde-3-phosphate dehydrogenase 2. (601 aa)
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (525 aa)
Sdel_0615TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: ccv:CCV52592_0512 D-3-phosphoglycerate dehydrogenase. (528 aa)
fbpFructose-bisphosphatase; PFAM: Inositol phosphatase/fructose-16- bisphosphatase; KEGG: abu:Abu_1219 fructose-1,6-bisphosphatase. (278 aa)
Sdel_0805PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: tdn:Suden_0820 formate dehydrogenase alpha subunit. (186 aa)
Sdel_0806PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: cco:CCC13826_0208 fumarate hydratase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (749 aa)
Sdel_0807PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nam:NAMH_1308 formate dehydrogenase subunit B. (199 aa)
Sdel_0808TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: dps:DP2988 formate dehydrogenase, gamma subunit. (299 aa)
Sdel_0813PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: ppd:Ppro_2088 formylmethanofuran dehydrogenase, subunit E region. (175 aa)
Sdel_0842TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: nam:NAMH_1207 ribose 5-phosphate isomerase B. (142 aa)
folDMethylenetetrahydrofolate dehydrogenase (NADP(+)); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (281 aa)
Sdel_0970TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B, N-terminal; aconitate hydratase domain protein; KEGG: nis:NIS_0828 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Belongs to the aconitase/IPM isomerase family. (853 aa)
Sdel_0972Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (790 aa)
Sdel_1014TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: cco:CCC13826_1403 threonine dehydratase. (403 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (404 aa)
Sdel_1045Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (702 aa)
Sdel_1081PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: cha:CHAB381_1142 2-oxoglutarate-acceptor oxidoreductase subunit OorC. (185 aa)
Sdel_1082PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cff:CFF8240_0907 2-oxoglutarate-acceptor oxidoreductase subunit OorB. (277 aa)
Sdel_1083PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cla:Cla_0816 2-oxoglutarate:acceptor oxidoreductase, OorA subunit. (377 aa)
Sdel_1084PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sun:SUN_0578 2-oxoglutarate-acceptor oxidoreductase subunit OorD. (105 aa)
sucDsuccinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
sucCsuccinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (391 aa)
mdhMalate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (316 aa)
Sdel_1089KEGG: son:SO_2629 isocitrate dehydrogenase, NADP- dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; Belongs to the monomeric-type IDH family. (745 aa)
pgiPFAM: phosphoglucose isomerase (PGI); KEGG: sun:SUN_1935 glucose-6-phosphate isomerase; Belongs to the GPI family. (422 aa)
Sdel_1184Heterodisulfide reductase subunit B-like protein; KEGG: sun:SUN_1202 succinate dehydrogenase/fumarate reductase, subunit C. (281 aa)
Sdel_1201PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: rfr:Rfer_1248 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding. (306 aa)
Sdel_1275KEGG: sun:SUN_0573 fumarate/tartrate hydratase, alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region. (283 aa)
Sdel_1276TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: nam:NAMH_1232 C-terminal fumarate hydratase, class I. (187 aa)
Sdel_1290KEGG: tdn:Suden_1133 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein. (237 aa)
Sdel_1332TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: abu:Abu_2299 cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (309 aa)
Sdel_1339Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (358 aa)
acsAacetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (648 aa)
Sdel_1607KEGG: abu:Abu_0860 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (213 aa)
Sdel_1699KEGG: wsu:WS1844 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase. (578 aa)
accAacetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (312 aa)
gpmIPhosphoglycerate mutase, 2,3-bisphosphoglycerate- independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (496 aa)
Sdel_1847PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; RimK domain protein ATP-grasp; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: abu:Abu_0605 acetyl CoA carboxylase, biotin carboxylase subunit. (481 aa)
Sdel_1898TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain; KEGG: cco:CCC13826_1933 pyruvate:ferredoxin (flavodoxin) oxidoreductase. (1187 aa)
Sdel_1933Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (656 aa)
Sdel_2072TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: cjd:JJD26997_1861 formate dehydrogenase, cytochrome b subunit. (299 aa)
Sdel_2073PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_0209 cytoplasmic membrane protein. (210 aa)
Sdel_2074PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dps:DP2986 formate dehydrogenase, chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (749 aa)
Sdel_2195Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)); PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: ccv:CCV52592_0547 malic enzyme NAD binding subunit. (424 aa)
Sdel_2198acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (443 aa)
Sdel_2199acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (154 aa)
Sdel_2232KEGG: cco:CCC13826_2287 citrate (Si)-synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family. (428 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (423 aa)
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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