Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACZ08491.1 | ACZ09609.1 | Sterm_1633 | Sterm_2764 | PFAM: glutaredoxin; KEGG: lpc:LPC_2103 hypothetical protein. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.423 |
| ACZ08491.1 | ACZ09610.1 | Sterm_1633 | Sterm_2765 | PFAM: glutaredoxin; KEGG: lpc:LPC_2103 hypothetical protein. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.948 |
| ACZ08491.1 | ACZ09611.1 | Sterm_1633 | Sterm_2766 | PFAM: glutaredoxin; KEGG: lpc:LPC_2103 hypothetical protein. | TIGRFAM: NrdI protein; PFAM: NrdI family protein; KEGG: sit:TM1040_0520 ribonucleotide reductase stimulatory protein; Belongs to the NrdI family. | 0.758 |
| ACZ08491.1 | ACZ09612.1 | Sterm_1633 | Sterm_2767 | PFAM: glutaredoxin; KEGG: lpc:LPC_2103 hypothetical protein. | Hypothetical protein; KEGG: TRX1; potential thioredoxin similar to S. cerevisiae TRX1 (YLR043C); K03671 thioredoxin 1. | 0.464 |
| ACZ09604.1 | ACZ09605.1 | Sterm_2759 | Sterm_2760 | KEGG: pmr:PMI1285 hypothetical protein. | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: NADH oxidase lateral transfer candidate. | 0.456 |
| ACZ09605.1 | ACZ09604.1 | Sterm_2760 | Sterm_2759 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: NADH oxidase lateral transfer candidate. | KEGG: pmr:PMI1285 hypothetical protein. | 0.456 |
| ACZ09605.1 | ACZ09606.1 | Sterm_2760 | Sterm_2761 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: NADH oxidase lateral transfer candidate. | Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | 0.556 |
| ACZ09606.1 | ACZ09605.1 | Sterm_2761 | Sterm_2760 | Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: NADH oxidase lateral transfer candidate. | 0.556 |
| ACZ09606.1 | ACZ09607.1 | Sterm_2761 | Sterm_2762 | Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | Amidohydrolase; KEGG: dac:Daci_1417 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. | 0.548 |
| ACZ09606.1 | ACZ09608.1 | Sterm_2761 | Sterm_2763 | Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | Hypothetical protein. | 0.534 |
| ACZ09606.1 | ACZ09609.1 | Sterm_2761 | Sterm_2764 | Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.522 |
| ACZ09606.1 | ACZ09610.1 | Sterm_2761 | Sterm_2765 | Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.415 |
| ACZ09607.1 | ACZ09606.1 | Sterm_2762 | Sterm_2761 | Amidohydrolase; KEGG: dac:Daci_1417 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. | Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | 0.548 |
| ACZ09607.1 | ACZ09608.1 | Sterm_2762 | Sterm_2763 | Amidohydrolase; KEGG: dac:Daci_1417 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. | Hypothetical protein. | 0.752 |
| ACZ09607.1 | ACZ09609.1 | Sterm_2762 | Sterm_2764 | Amidohydrolase; KEGG: dac:Daci_1417 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.464 |
| ACZ09607.1 | ACZ09610.1 | Sterm_2762 | Sterm_2765 | Amidohydrolase; KEGG: dac:Daci_1417 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.408 |
| ACZ09607.1 | ACZ09611.1 | Sterm_2762 | Sterm_2766 | Amidohydrolase; KEGG: dac:Daci_1417 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. | TIGRFAM: NrdI protein; PFAM: NrdI family protein; KEGG: sit:TM1040_0520 ribonucleotide reductase stimulatory protein; Belongs to the NrdI family. | 0.408 |
| ACZ09607.1 | ACZ09612.1 | Sterm_2762 | Sterm_2767 | Amidohydrolase; KEGG: dac:Daci_1417 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. | Hypothetical protein; KEGG: TRX1; potential thioredoxin similar to S. cerevisiae TRX1 (YLR043C); K03671 thioredoxin 1. | 0.413 |
| ACZ09608.1 | ACZ09606.1 | Sterm_2763 | Sterm_2761 | Hypothetical protein. | Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | 0.534 |
| ACZ09608.1 | ACZ09607.1 | Sterm_2763 | Sterm_2762 | Hypothetical protein. | Amidohydrolase; KEGG: dac:Daci_1417 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. | 0.752 |
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