STRINGSTRING
VDBG_00295 VDBG_00295 VDBG_00043 VDBG_00043 VDBG_03906 VDBG_03906 VDBG_04314 VDBG_04314 VDBG_05822 VDBG_05822 BNA5 BNA5 VDBG_09667 VDBG_09667
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00295Indoleamine 2,3-dioxygenase family protein. (502 aa)
VDBG_00043Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. Kynurenine may be further oxidized to nicotinic acid, NAD(H) and NADP(H). Required for elimination of toxic metabolites. (277 aa)
VDBG_03906Kynurenine 3-monooxygenase. (437 aa)
VDBG_04314Indoleamine 2,3-dioxygenase family protein. (499 aa)
VDBG_05822Kynurenine-oxoglutarate transaminase. (426 aa)
BNA5Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family. (488 aa)
VDBG_09667Indoleamine 2,3-dioxygenase. (436 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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