STRINGSTRING
VDBG_01136 VDBG_01136 VDBG_00632 VDBG_00632 VDBG_00635 VDBG_00635 VDBG_00755 VDBG_00755 VDBG_01450 VDBG_01450 VDBG_00192 VDBG_00192 VDBG_01618 VDBG_01618 VDBG_01893 VDBG_01893 VDBG_01914 VDBG_01914 VDBG_02949 VDBG_02949 VDBG_04139 VDBG_04139 VDBG_04735 VDBG_04735 VDBG_04839 VDBG_04839 VDBG_05179 VDBG_05179 VDBG_05423 VDBG_05423 VDBG_07304 VDBG_07304 VDBG_07313 VDBG_07313 VDBG_07639 VDBG_07639 VDBG_08048 VDBG_08048 VDBG_08197 VDBG_08197 VDBG_08651 VDBG_08651 VDBG_08910 VDBG_08910
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_01136Transmembrane domain-containing protein. (173 aa)
VDBG_00632Delta(24(24(1)))-sterol reductase. (628 aa)
VDBG_00635C-5 sterol desaturase; Belongs to the sterol desaturase family. (309 aa)
VDBG_00755Cytochrome P450 61; Belongs to the cytochrome P450 family. (533 aa)
VDBG_01450Sterol desaturase family; Belongs to the sterol desaturase family. (337 aa)
VDBG_00192Cytochrome P450 61; Belongs to the cytochrome P450 family. (533 aa)
VDBG_01618Squalene monooxygenase. (508 aa)
VDBG_01893Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (690 aa)
VDBG_01914Sterol 24-C-methyltransferase; Catalyzes the methyl transfer from S-adenosyl-methionine to the C-24 of zymosterol to form fecosterol. (381 aa)
VDBG_02949Uncharacterized protein. (244 aa)
VDBG_04139C-8 sterol isomerase. (225 aa)
VDBG_04735Sterol-4-alpha-carboxylate 3-dehydrogenase. (393 aa)
VDBG_04839Cytochrome P450 51; Belongs to the cytochrome P450 family. (470 aa)
VDBG_05179C-4 methylsterol oxidase; Belongs to the sterol desaturase family. (306 aa)
VDBG_054237-dehydrocholesterol reductase. (399 aa)
VDBG_07304Squalene synthetase. (366 aa)
VDBG_07313Delta(24(24(1)))-sterol reductase. (576 aa)
VDBG_07639Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (732 aa)
VDBG_080483-ketosteroid reductase. (463 aa)
VDBG_08197FAD binding domain-containing protein. (521 aa)
VDBG_08651C-5 sterol desaturase. (311 aa)
VDBG_08910Sterol 24-C-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family. (395 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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