(26 nodes) Mixed, incl. Sphingolipid metabolism, and Exopolyphosphatase activity network (Verticillium alfalfae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_00624	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides. (381 aa)
	VDBG_01300	DHHA2 domain-containing protein. (399 aa)
	VDBG_00970	Predicted protein. (767 aa)
	VDBG_01425	Sphingoid long chain base kinase. (531 aa)
	VDBG_02200	WD repeat and FYVE domain-containing protein. (2531 aa)
	VDBG_02291	Sphingosine N-acyltransferase lag1. (451 aa)
	VDBG_02819	Sphingolipid C4-hydroxylase SUR2; Belongs to the sterol desaturase family. (368 aa)
	VDBG_02930	Endonuclease/exonuclease/phosphatase family protein. (167 aa)
	VDBG_04131	Predicted protein. (109 aa)
	VDBG_04427	Endopolyphosphatase; Catalyzes the hydrolysis of inorganic polyphosphate (polyP) chains of many hundreds of phosphate residues into shorter lengths. (639 aa)
	VDBG_05290	Sphingosine-1-phosphate lyase. (566 aa)
	VDBG_05537	Long-chain base protein. (557 aa)
	VDBG_05674	Uncharacterized protein. (327 aa)
	VDBG_06298	Uncharacterized protein. (302 aa)
	VDBG_06777	RTA1 domain-containing protein. (338 aa)
	VDBG_06901	3-ketodihydrosphingosine reductase tsc10. (328 aa)
	VDBG_07031	Sphingosine N-acyltransferase lac1. (478 aa)
	VDBG_07251	RTA1 domain-containing protein. (336 aa)
	VDBG_07422	Serine palmitoyltransferase. (836 aa)
	VDBG_07644	Ceramide glucosyltransferase. (540 aa)
	VDBG_07722	Serine palmitoyltransferase. (663 aa)
	VDBG_07895	NAAA-beta domain-containing protein. (424 aa)
	VDBG_08059	Neutral ceramidase. (723 aa)
	VDBG_08524	DUF4396 domain-containing protein. (210 aa)
	VDBG_09616	Uncharacterized protein. (493 aa)
	VDBG_10206	Dihydroceramidase. (210 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00624	VDBG_00970	C9S6M5	C9S7X6	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	Predicted protein.	0.469
VDBG_00624	VDBG_01425	C9S6M5	C9S866	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	Sphingoid long chain base kinase.	0.947
VDBG_00624	VDBG_02291	C9S6M5	C9S9W9	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	Sphingosine N-acyltransferase lag1.	0.929
VDBG_00624	VDBG_02819	C9S6M5	C9SC95	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	Sphingolipid C4-hydroxylase SUR2; Belongs to the sterol desaturase family.	0.908
VDBG_00624	VDBG_02930	C9S6M5	C9SCK6	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	Endonuclease/exonuclease/phosphatase family protein.	0.514
VDBG_00624	VDBG_05537	C9S6M5	C9SL60	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	Long-chain base protein.	0.925
VDBG_00624	VDBG_06901	C9S6M5	C9SPS6	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	3-ketodihydrosphingosine reductase tsc10.	0.932
VDBG_00624	VDBG_07031	C9S6M5	C9SPZ6	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	Sphingosine N-acyltransferase lac1.	0.929
VDBG_00624	VDBG_07422	C9S6M5	C9SR97	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	Serine palmitoyltransferase.	0.651
VDBG_00624	VDBG_07644	C9S6M5	C9SRW9	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	Ceramide glucosyltransferase.	0.961
VDBG_00624	VDBG_07722	C9S6M5	C9SS47	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	Serine palmitoyltransferase.	0.655
VDBG_00624	VDBG_08059	C9S6M5	C9ST34	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	Neutral ceramidase.	0.925
VDBG_00624	VDBG_10206	C9S6M5	C9SZ81	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	Dihydroceramidase.	0.942
VDBG_00970	VDBG_00624	C9S7X6	C9S6M5	Predicted protein.	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	0.469
VDBG_00970	VDBG_01425	C9S7X6	C9S866	Predicted protein.	Sphingoid long chain base kinase.	0.412
VDBG_00970	VDBG_07422	C9S7X6	C9SR97	Predicted protein.	Serine palmitoyltransferase.	0.805
VDBG_00970	VDBG_07722	C9S7X6	C9SS47	Predicted protein.	Serine palmitoyltransferase.	0.686
VDBG_01300	VDBG_04131	C9S6T8	C9SFS7	DHHA2 domain-containing protein.	Predicted protein.	0.494
VDBG_01300	VDBG_04427	C9S6T8	C9SJF6	DHHA2 domain-containing protein.	Endopolyphosphatase; Catalyzes the hydrolysis of inorganic polyphosphate (polyP) chains of many hundreds of phosphate residues into shorter lengths.	0.635
VDBG_01425	VDBG_00624	C9S866	C9S6M5	Sphingoid long chain base kinase.	Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.	0.947