STRINGSTRING
VDBG_00280 VDBG_00280 VDBG_01212 VDBG_01212 VDBG_01436 VDBG_01436 VDBG_01448 VDBG_01448 VDBG_01466 VDBG_01466 VDBG_00212 VDBG_00212 VDBG_01939 VDBG_01939 VDBG_03238 VDBG_03238 VDBG_03285 VDBG_03285 VDBG_02559 VDBG_02559 VDBG_02764 VDBG_02764 VDBG_04658 VDBG_04658 VDBG_05214 VDBG_05214 VDBG_05639 VDBG_05639 VDBG_05648 VDBG_05648 VDBG_06244 VDBG_06244 VDBG_07112 VDBG_07112 VDBG_07786 VDBG_07786 VDBG_07793 VDBG_07793 VDBG_08621 VDBG_08621 VDBG_08669 VDBG_08669 VDBG_08670 VDBG_08670 VDBG_08967 VDBG_08967 VDBG_09106 VDBG_09106 VDBG_09658 VDBG_09658
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00280Voltage-gated potassium channel beta-1 subunit. (347 aa)
VDBG_01212Norsolorinic acid reductase. (383 aa)
VDBG_01436Aldehyde reductase. (325 aa)
VDBG_01448GCY. (298 aa)
VDBG_01466Voltage-gated potassium channel subunit beta-1. (276 aa)
VDBG_00212Dihydrodipicolinate synthase; Belongs to the DapA family. (293 aa)
VDBG_01939GCY. (315 aa)
VDBG_03238GCY. (323 aa)
VDBG_03285Prolyl 4-hydroxylase. (484 aa)
VDBG_02559Aldo-keto reductase family 1 member E1. (288 aa)
VDBG_02764GCY. (252 aa)
VDBG_04658Norsolorinic acid reductase. (337 aa)
VDBG_05214Oxidoreductase. (164 aa)
VDBG_05639Integral membrane protein. (221 aa)
VDBG_056482,5-diketo-D-gluconic acid reductase A. (277 aa)
VDBG_06244Auxin-induced protein PCNT115. (344 aa)
VDBG_07112Aldo-keto reductase yakc. (180 aa)
VDBG_07786Aldose reductase. (308 aa)
VDBG_077932,5-diketo-D-gluconic acid reductase A. (227 aa)
VDBG_086212,5-diketo-D-gluconic acid reductase A. (268 aa)
VDBG_08669Aldo-keto reductase. (107 aa)
VDBG_086702,5-diketo-D-gluconic acid reductase A. (78 aa)
VDBG_08967Voltage-gated potassium channel subunit beta-3. (350 aa)
VDBG_09106Voltage-gated potassium channel subunit beta-2. (333 aa)
VDBG_09658D-threo-aldose 1-dehydrogenase. (286 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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