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VDBG_00323 VDBG_00323 VDBG_01431 VDBG_01431 VDBG_02298 VDBG_02298 VDBG_02299 VDBG_02299 VDBG_01777 VDBG_01777 VDBG_01853 VDBG_01853 VDBG_03325 VDBG_03325 VDBG_03614 VDBG_03614 VDBG_05072 VDBG_05072 VDBG_09109 VDBG_09109 VDBG_09557 VDBG_09557
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00323Isocitrate lyase. (546 aa)
VDBG_01431Glyoxylate reductase. (245 aa)
VDBG_02298Mitochondrial 2-methylisocitrate lyase. (108 aa)
VDBG_02299Isocitrate lyase. (474 aa)
VDBG_01777Malate synthase; Belongs to the malate synthase family. (440 aa)
VDBG_01853Dihydrodipicolinate synthase; Belongs to the DapA family. (330 aa)
VDBG_03325Dihydrodipicolinate synthase; Belongs to the DapA family. (310 aa)
VDBG_03614Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (358 aa)
VDBG_05072Dihydrodipicolinate synthase; Belongs to the DapA family. (331 aa)
VDBG_09109Dihydrodipicolinate synthase. (328 aa)
VDBG_09557Dihydrodipicolinate synthetase family protein; Belongs to the DapA family. (324 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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