(11 nodes) Snf7 family, and Vps4 oligomerisation, C-terminal network (Verticillium alfalfae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_00559	Vacuolar-sorting protein snf7. (223 aa)
	VDBG_01030	DUF292 domain-containing protein. (302 aa)
	VDBG_01917	Uncharacterized protein. (205 aa)
	VDBG_02863	Charged multivesicular body protein. (214 aa)
	VDBG_03269	Vacuolar protein sorting-associated protein; Belongs to the AAA ATPase family. (404 aa)
	VDBG_03677	Charged multivesicular body protein. (198 aa)
	VDBG_05235	Vacuolar protein-sorting-associated protein. (228 aa)
	VDBG_07830	DOA4-independent degradation protein. (201 aa)
	VDBG_08324	Uncharacterized protein. (361 aa)
	VDBG_09683	SAP1; Belongs to the AAA ATPase family. (783 aa)
	VDBG_09934	Vta1 domain-containing protein. (253 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00559	VDBG_01030	C9S6D9	C9S8E2	Vacuolar-sorting protein snf7.	DUF292 domain-containing protein.	0.981
VDBG_00559	VDBG_01917	C9S6D9	C9SBS4	Vacuolar-sorting protein snf7.	Uncharacterized protein.	0.955
VDBG_00559	VDBG_02863	C9S6D9	C9SCD9	Vacuolar-sorting protein snf7.	Charged multivesicular body protein.	0.980
VDBG_00559	VDBG_03269	C9S6D9	C9SDP0	Vacuolar-sorting protein snf7.	Vacuolar protein sorting-associated protein; Belongs to the AAA ATPase family.	0.998
VDBG_00559	VDBG_03677	C9S6D9	C9SGU6	Vacuolar-sorting protein snf7.	Charged multivesicular body protein.	0.997
VDBG_00559	VDBG_05235	C9S6D9	C9SKA8	Vacuolar-sorting protein snf7.	Vacuolar protein-sorting-associated protein.	0.998
VDBG_00559	VDBG_07830	C9S6D9	C9SSF5	Vacuolar-sorting protein snf7.	DOA4-independent degradation protein.	0.998
VDBG_00559	VDBG_08324	C9S6D9	C9STQ3	Vacuolar-sorting protein snf7.	Uncharacterized protein.	0.996
VDBG_00559	VDBG_09683	C9S6D9	C9SXQ8	Vacuolar-sorting protein snf7.	SAP1; Belongs to the AAA ATPase family.	0.821
VDBG_00559	VDBG_09934	C9S6D9	C9SYF9	Vacuolar-sorting protein snf7.	Vta1 domain-containing protein.	0.913
VDBG_01030	VDBG_00559	C9S8E2	C9S6D9	DUF292 domain-containing protein.	Vacuolar-sorting protein snf7.	0.981
VDBG_01030	VDBG_01917	C9S8E2	C9SBS4	DUF292 domain-containing protein.	Uncharacterized protein.	0.994
VDBG_01030	VDBG_02863	C9S8E2	C9SCD9	DUF292 domain-containing protein.	Charged multivesicular body protein.	0.947
VDBG_01030	VDBG_03269	C9S8E2	C9SDP0	DUF292 domain-containing protein.	Vacuolar protein sorting-associated protein; Belongs to the AAA ATPase family.	0.993
VDBG_01030	VDBG_03677	C9S8E2	C9SGU6	DUF292 domain-containing protein.	Charged multivesicular body protein.	0.956
VDBG_01030	VDBG_05235	C9S8E2	C9SKA8	DUF292 domain-containing protein.	Vacuolar protein-sorting-associated protein.	0.966
VDBG_01030	VDBG_07830	C9S8E2	C9SSF5	DUF292 domain-containing protein.	DOA4-independent degradation protein.	0.972
VDBG_01030	VDBG_08324	C9S8E2	C9STQ3	DUF292 domain-containing protein.	Uncharacterized protein.	0.932
VDBG_01030	VDBG_09683	C9S8E2	C9SXQ8	DUF292 domain-containing protein.	SAP1; Belongs to the AAA ATPase family.	0.962
VDBG_01030	VDBG_09934	C9S8E2	C9SYF9	DUF292 domain-containing protein.	Vta1 domain-containing protein.	0.967