STRINGSTRING
VDBG_04134 VDBG_04134 VDBG_06667 VDBG_06667 VDBG_08268 VDBG_08268 VDBG_08864 VDBG_08864 VDBG_10096 VDBG_10096
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_04134ATP-dependent DNA ligase domain-containing protein. (556 aa)
VDBG_06667DNA ligase. (944 aa)
VDBG_08268Ku70. (645 aa)
VDBG_08864ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. (722 aa)
VDBG_10096Artemis protein. (657 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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