STRINGSTRING
VDBG_00252 VDBG_00252 VDBG_00303 VDBG_00303 VDBG_00310 VDBG_00310 VDBG_01185 VDBG_01185 VDBG_00355 VDBG_00355 VDBG_00502 VDBG_00502 VDBG_00592 VDBG_00592 VDBG_00656 VDBG_00656 VDBG_00676 VDBG_00676 VDBG_00781 VDBG_00781 VDBG_00811 VDBG_00811 VDBG_01352 VDBG_01352 VDBG_00940 VDBG_00940 VDBG_00941 VDBG_00941 VDBG_01411 VDBG_01411 VDBG_01441 VDBG_01441 VDBG_00011 VDBG_00011 VDBG_00021 VDBG_00021 VDBG_01449 VDBG_01449 VDBG_00101 VDBG_00101 VDBG_00155 VDBG_00155 VDBG_00203 VDBG_00203 VDBG_01101 VDBG_01101 VDBG_02205 VDBG_02205 VDBG_02265 VDBG_02265 VDBG_02310 VDBG_02310 VDBG_02311 VDBG_02311 VDBG_02373 VDBG_02373 VDBG_02405 VDBG_02405 VDBG_02450 VDBG_02450 VDBG_01677 VDBG_01677 VDBG_01963 VDBG_01963 VDBG_02025 VDBG_02025 VDBG_02032 VDBG_02032 VDBG_02809 VDBG_02809 VDBG_02830 VDBG_02830 VDBG_02862 VDBG_02862 VDBG_03039 VDBG_03039 VDBG_03251 VDBG_03251 VDBG_02537 VDBG_02537 VDBG_03272 VDBG_03272 VDBG_02577 VDBG_02577 VDBG_03414 VDBG_03414 VDBG_03999 VDBG_03999 VDBG_03456 VDBG_03456 VDBG_04137 VDBG_04137 VDBG_04152 VDBG_04152 VDBG_04154 VDBG_04154 VDBG_03487 VDBG_03487 VDBG_04178 VDBG_04178 VDBG_04208 VDBG_04208 VDBG_04214 VDBG_04214 VDBG_03598 VDBG_03598 VDBG_03610 VDBG_03610 VDBG_04239 VDBG_04239 VDBG_03629 VDBG_03629 VDBG_04279 VDBG_04279 VDBG_04281 VDBG_04281 VDBG_03686 VDBG_03686 VDBG_03716 VDBG_03716 VDBG_03746 VDBG_03746 VDBG_04650 VDBG_04650 VDBG_04672 VDBG_04672 VDBG_04701 VDBG_04701 VDBG_04714 VDBG_04714 VDBG_04729 VDBG_04729 VDBG_04731 VDBG_04731 VDBG_04790 VDBG_04790 VDBG_04809 VDBG_04809 VDBG_04830 VDBG_04830 VDBG_04905 VDBG_04905 VDBG_04934 VDBG_04934 VDBG_05025 VDBG_05025 VDBG_05027 VDBG_05027 VDBG_05035 VDBG_05035 VDBG_04351 VDBG_04351 VDBG_04353 VDBG_04353 VDBG_04362 VDBG_04362 VDBG_04363 VDBG_04363 VDBG_04364 VDBG_04364 VDBG_04383 VDBG_04383 VDBG_04387 VDBG_04387 VDBG_05087 VDBG_05087 VDBG_05129 VDBG_05129 VDBG_05144 VDBG_05144 VDBG_05210 VDBG_05210 VDBG_05226 VDBG_05226 VDBG_05258 VDBG_05258 VDBG_05293 VDBG_05293 VDBG_05387 VDBG_05387 VDBG_05506 VDBG_05506 VDBG_05540 VDBG_05540 VDBG_05838 VDBG_05838 VDBG_05843 VDBG_05843 VDBG_05854 VDBG_05854 VDBG_05971 VDBG_05971 VDBG_06019 VDBG_06019 VDBG_06182 VDBG_06182 VDBG_06529 VDBG_06529 VDBG_06606 VDBG_06606 VDBG_06701 VDBG_06701 VDBG_06727 VDBG_06727 VDBG_06832 VDBG_06832 VDBG_06868 VDBG_06868 VDBG_06879 VDBG_06879 VDBG_06932 VDBG_06932 VDBG_07071 VDBG_07071 VDBG_07100 VDBG_07100 VDBG_07135 VDBG_07135 VDBG_07294 VDBG_07294 VDBG_07295 VDBG_07295 VDBG_07339 VDBG_07339 VDBG_07437 VDBG_07437 VDBG_07459 VDBG_07459 VDBG_07511 VDBG_07511 VDBG_07733 VDBG_07733 VDBG_07736 VDBG_07736 VDBG_07737 VDBG_07737 VDBG_07838 VDBG_07838 VDBG_07910 VDBG_07910 VDBG_07911 VDBG_07911 VDBG_07966 VDBG_07966 VDBG_07967 VDBG_07967 VDBG_08022 VDBG_08022 VDBG_08023 VDBG_08023 VDBG_08134 VDBG_08134 VDBG_08163 VDBG_08163 VDBG_08295 VDBG_08295 VDBG_08325 VDBG_08325 VDBG_08365 VDBG_08365 VDBG_08601 VDBG_08601 VDBG_08639 VDBG_08639 VDBG_08656 VDBG_08656 VDBG_08695 VDBG_08695 VDBG_08745 VDBG_08745 VDBG_09006 VDBG_09006 VDBG_09051 VDBG_09051 VDBG_09194 VDBG_09194 VDBG_09277 VDBG_09277 VDBG_09296 VDBG_09296 VDBG_09657 VDBG_09657 VDBG_09377 VDBG_09377 VDBG_09515 VDBG_09515 VDBG_09516 VDBG_09516 VDBG_09734 VDBG_09734 VDBG_09735 VDBG_09735 VDBG_09806 VDBG_09806 VDBG_10007 VDBG_10007 VDBG_10030 VDBG_10030 VDBG_10062 VDBG_10062 VDBG_10107 VDBG_10107 VDBG_10174 VDBG_10174
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00252Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. (1148 aa)
VDBG_00303NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. (185 aa)
VDBG_00310Predicted protein. (180 aa)
VDBG_01185DNA damage-binding protein 1b. (1119 aa)
VDBG_00355Uncharacterized protein. (265 aa)
VDBG_00502Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (254 aa)
VDBG_00592Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. (879 aa)
VDBG_00656SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
VDBG_00676IFRD domain-containing protein. (464 aa)
VDBG_00781NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme. (537 aa)
VDBG_00811UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family. (1037 aa)
VDBG_01352U-box domain-containing protein. (224 aa)
VDBG_00940MitMem_reg domain-containing protein. (292 aa)
VDBG_00941Uncharacterized protein. (48 aa)
VDBG_0141126S protease regulatory subunit 6A-B. (231 aa)
VDBG_01441Predicted protein. (92 aa)
VDBG_00011Uncharacterized protein. (152 aa)
VDBG_00021Ubiquitin-conjugating enzyme. (182 aa)
VDBG_01449Ubiquitin-conjugating enzyme. (163 aa)
VDBG_00101Proteasome subunit alpha type. (269 aa)
VDBG_00155Ubiquitin C-terminal hydrolase family protein. (746 aa)
VDBG_00203Ubiquitin-conjugating enzyme. (236 aa)
VDBG_01101Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (174 aa)
VDBG_02205Uncharacterized protein. (376 aa)
VDBG_0226526S proteasome regulatory subunit RPN5. (492 aa)
VDBG_02310COP9 signalosome complex subunit 2. (491 aa)
VDBG_02311Ubiquitin thioesterase OTUB1. (648 aa)
VDBG_02373Ubiquitin carboxyl-terminal hydrolase. (274 aa)
VDBG_02405Proteasome component ECM29. (1659 aa)
VDBG_02450Proteasome component PRE3. (364 aa)
VDBG_01677Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (171 aa)
VDBG_01963Ubiquitin carboxyl-terminal hydrolase. (541 aa)
VDBG_02025APH domain-containing protein. (263 aa)
VDBG_02032LEC14B protein. (497 aa)
VDBG_02809COP9 signalosome complex subunit 1. (420 aa)
VDBG_02830Proteasome endopeptidase complex. (283 aa)
VDBG_02862F-box/WD repeat-containing protein 1A. (1033 aa)
VDBG_03039Uncharacterized protein. (518 aa)
VDBG_03251RBR-type E3 ubiquitin transferase. (430 aa)
VDBG_02537Ubiquitin carboxyl-terminal hydrolase. (239 aa)
VDBG_03272STAM-binding protein. (534 aa)
VDBG_02577Nucleotide excision repair protein RAD23. (394 aa)
VDBG_03414ULP_PROTEASE domain-containing protein. (817 aa)
VDBG_0399926S proteasome regulatory subunit rpn-8. (351 aa)
VDBG_03456Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (110 aa)
VDBG_04137Uncharacterized protein. (697 aa)
VDBG_04152Proteasome subunit beta. (182 aa)
VDBG_04154Sentrin-specific protease. (1079 aa)
VDBG_03487DNA repair protein rhp42. (1024 aa)
VDBG_04178E3 ubiquitin-protein ligase SHPRH. (1401 aa)
VDBG_04208WD repeat-containing protein. (707 aa)
VDBG_04214Uncharacterized protein. (578 aa)
VDBG_03598DNA methyltransferase Dim-2. (1373 aa)
VDBG_0361026S proteasome non-ATPase regulatory subunit 3. (553 aa)
VDBG_04239Uncharacterized protein. (208 aa)
VDBG_0362926S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (421 aa)
VDBG_04279Uncharacterized protein. (907 aa)
VDBG_04281SP-RING-type domain-containing protein. (382 aa)
VDBG_03686Deubiquitination-protection protein dph1. (413 aa)
VDBG_03716F-box protein pof7. (522 aa)
VDBG_03746COP9 signalosome complex subunit 7a. (248 aa)
VDBG_04650Ubiquitin-conjugating enzyme. (438 aa)
VDBG_04672Ubiquitin-conjugating enzyme. (178 aa)
VDBG_04701NEDD8-activating enzyme E1 catalytic subunit. (433 aa)
VDBG_04714Proteasome component PUP1. (99 aa)
VDBG_0472926S protease regulatory subunit S10B; Belongs to the AAA ATPase family. (361 aa)
VDBG_04731Proteasome subunit beta; Belongs to the peptidase T1B family. (276 aa)
VDBG_04790Proteasome subunit beta. (286 aa)
VDBG_04809COP9 signalosome complex subunit 4. (298 aa)
VDBG_04830Uncharacterized protein. (570 aa)
VDBG_0490526S protease regulatory subunit 7; Belongs to the AAA ATPase family. (439 aa)
VDBG_04934Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (155 aa)
VDBG_05025Proteasome endopeptidase complex. (313 aa)
VDBG_05027DnaJ domain-containing protein. (206 aa)
VDBG_05035Cullin-3; Belongs to the cullin family. (815 aa)
VDBG_04351Predicted protein. (120 aa)
VDBG_04353Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
VDBG_04362Cullin-1. (112 aa)
VDBG_04363Cullin-1; Belongs to the cullin family. (235 aa)
VDBG_04364Predicted protein. (67 aa)
VDBG_04383DNA damage-inducible protein. (181 aa)
VDBG_04387Proteasome subunit alpha type. (243 aa)
VDBG_05087Ankyrin repeat-containing protein. (238 aa)
VDBG_0512926S proteasome non-ATPase regulatory subunit 4. (268 aa)
VDBG_05144Proteasome component C5. (264 aa)
VDBG_05210Ubiquitin-like domain-containing protein. (203 aa)
VDBG_05226UBIQUITIN_CONJUGAT_2 domain-containing protein. (1038 aa)
VDBG_05258E3 ubiquitin-protein ligase. (3731 aa)
VDBG_05293Proteasome endopeptidase complex. (263 aa)
VDBG_0538726S proteasome non-ATPase regulatory subunit 11. (402 aa)
VDBG_05506Proteasome 19S regulatory particle. (93 aa)
VDBG_05540Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family. (622 aa)
VDBG_05838SMT3. (98 aa)
VDBG_0584326S proteasome non-ATPase regulatory subunit 9. (225 aa)
VDBG_05854Ubiquitin. (82 aa)
VDBG_05971Proteasome component PUP3. (191 aa)
VDBG_06019E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1955 aa)
VDBG_06182AAA domain-containing protein. (678 aa)
VDBG_06529Cullin-associated NEDD8-dissociated protein. (1302 aa)
VDBG_06606Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)
VDBG_06701Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. (1870 aa)
VDBG_06727S-phase kinase-associated protein 1A; Belongs to the SKP1 family. (169 aa)
VDBG_06832Cullin-4B; Belongs to the cullin family. (777 aa)
VDBG_06868NTF2 and RRM domain-containing protein. (392 aa)
VDBG_06879Uncharacterized protein. (496 aa)
VDBG_06932COP9 signalosome complex subunit 5. (373 aa)
VDBG_07071Ubiquitinyl hydrolase 1. (528 aa)
VDBG_0710026S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (857 aa)
VDBG_07135RING-7 protein. (461 aa)
VDBG_0729426S proteasome regulatory subunit rpn11. (336 aa)
VDBG_07295Uncharacterized protein. (313 aa)
VDBG_07339PNG1. (473 aa)
VDBG_0743726S proteasome regulatory subunit RPN9. (382 aa)
VDBG_0745926S proteasome regulatory subunit rpn12. (286 aa)
VDBG_07511USP domain-containing protein; Belongs to the peptidase C19 family. (1063 aa)
VDBG_07733Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (195 aa)
VDBG_07736DNA repair protein RAD5. (169 aa)
VDBG_07737DNA repair protein RAD5. (1130 aa)
VDBG_07838Uncharacterized protein. (1956 aa)
VDBG_07910E3 ubiquitin-protein ligase UPL3. (1790 aa)
VDBG_07911Uncharacterized protein. (349 aa)
VDBG_07966Uncharacterized protein. (270 aa)
VDBG_0796726S proteasome non-ATPase regulatory subunit 6. (79 aa)
VDBG_08022Ubiquitin. (126 aa)
VDBG_08023Uncharacterized protein. (692 aa)
VDBG_08134Ubiquitin-protein ligase E3C. (1133 aa)
VDBG_08163Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (188 aa)
VDBG_0829526S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (884 aa)
VDBG_08325RING-type domain-containing protein. (294 aa)
VDBG_08365Proteasome maturation factor UMP1. (161 aa)
VDBG_08601YDG domain-containing protein. (332 aa)
VDBG_08639RING-box protein. (119 aa)
VDBG_08656MIZ zinc finger protein. (413 aa)
VDBG_08695F-box/WD repeat-containing protein. (673 aa)
VDBG_08745DNA damage tolerance protein rad31. (487 aa)
VDBG_09006Predicted protein. (259 aa)
VDBG_09051SCF E3 ubiquitin ligase complex F-box protein grrA. (769 aa)
VDBG_09194Nucleoside-diphosphate-sugar epimerase family protein. (303 aa)
VDBG_09277Uncharacterized protein. (191 aa)
VDBG_09296DNA repair protein rhp41. (777 aa)
VDBG_09657Uncharacterized protein. (665 aa)
VDBG_09377Ubiquitin carboxyl-terminal hydrolase. (318 aa)
VDBG_0951526S protease regulatory subunit 4; Belongs to the AAA ATPase family. (439 aa)
VDBG_09516Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (237 aa)
VDBG_09734F-box domain-containing protein. (529 aa)
VDBG_09735Ubiquitin carboxyl-terminal hydrolase. (479 aa)
VDBG_09806WD repeat-containing protein. (565 aa)
VDBG_10007Proteasome subunit alpha type. (251 aa)
VDBG_10030Cell division control protein. (638 aa)
VDBG_10062Ubiquitin-conjugating enzyme variant MMS2. (140 aa)
VDBG_10107Predicted protein. (169 aa)
VDBG_10174Predicted protein. (256 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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