5 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_02265	26S proteasome regulatory subunit RPN5. (492 aa)
	VDBG_03610	26S proteasome non-ATPase regulatory subunit 3. (553 aa)
	VDBG_07437	26S proteasome regulatory subunit RPN9. (382 aa)
	VDBG_07966	Uncharacterized protein. (270 aa)
	VDBG_08295	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (884 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_02265	VDBG_03610	C9S9U3	C9SGG1	26S proteasome regulatory subunit RPN5.	26S proteasome non-ATPase regulatory subunit 3.	0.999
VDBG_02265	VDBG_07437	C9S9U3	C9SRB2	26S proteasome regulatory subunit RPN5.	26S proteasome regulatory subunit RPN9.	0.999
VDBG_02265	VDBG_07966	C9S9U3	C9SSU1	26S proteasome regulatory subunit RPN5.	Uncharacterized protein.	0.992
VDBG_02265	VDBG_08295	C9S9U3	C9STM4	26S proteasome regulatory subunit RPN5.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
VDBG_03610	VDBG_02265	C9SGG1	C9S9U3	26S proteasome non-ATPase regulatory subunit 3.	26S proteasome regulatory subunit RPN5.	0.999
VDBG_03610	VDBG_07437	C9SGG1	C9SRB2	26S proteasome non-ATPase regulatory subunit 3.	26S proteasome regulatory subunit RPN9.	0.999
VDBG_03610	VDBG_07966	C9SGG1	C9SSU1	26S proteasome non-ATPase regulatory subunit 3.	Uncharacterized protein.	0.984
VDBG_03610	VDBG_08295	C9SGG1	C9STM4	26S proteasome non-ATPase regulatory subunit 3.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
VDBG_07437	VDBG_02265	C9SRB2	C9S9U3	26S proteasome regulatory subunit RPN9.	26S proteasome regulatory subunit RPN5.	0.999
VDBG_07437	VDBG_03610	C9SRB2	C9SGG1	26S proteasome regulatory subunit RPN9.	26S proteasome non-ATPase regulatory subunit 3.	0.999
VDBG_07437	VDBG_07966	C9SRB2	C9SSU1	26S proteasome regulatory subunit RPN9.	Uncharacterized protein.	0.991
VDBG_07437	VDBG_08295	C9SRB2	C9STM4	26S proteasome regulatory subunit RPN9.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
VDBG_07966	VDBG_02265	C9SSU1	C9S9U3	Uncharacterized protein.	26S proteasome regulatory subunit RPN5.	0.992
VDBG_07966	VDBG_03610	C9SSU1	C9SGG1	Uncharacterized protein.	26S proteasome non-ATPase regulatory subunit 3.	0.984
VDBG_07966	VDBG_07437	C9SSU1	C9SRB2	Uncharacterized protein.	26S proteasome regulatory subunit RPN9.	0.991
VDBG_07966	VDBG_08295	C9SSU1	C9STM4	Uncharacterized protein.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.979
VDBG_08295	VDBG_02265	C9STM4	C9S9U3	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory subunit RPN5.	0.999
VDBG_08295	VDBG_03610	C9STM4	C9SGG1	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome non-ATPase regulatory subunit 3.	0.999
VDBG_08295	VDBG_07437	C9STM4	C9SRB2	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory subunit RPN9.	0.999
VDBG_08295	VDBG_07966	C9STM4	C9SSU1	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	Uncharacterized protein.	0.979