(13 nodes) Cdc73/Paf1 complex, and Elongin complex network (Verticillium alfalfae)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Predicted Interactions

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Your Input:
	VDBG_00334	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1412 aa)
	VDBG_00343	FACT complex subunit SPT16. (1014 aa)
	VDBG_01069	Cell division control protein. (345 aa)
	VDBG_01545	Uncharacterized protein. (109 aa)
	VDBG_01726	Plus3 domain-containing protein. (588 aa)
	VDBG_01886	Transcription factor IWS1. (426 aa)
	VDBG_04535	Uncharacterized protein. (106 aa)
	VDBG_05853	Uncharacterized protein. (414 aa)
	VDBG_06895	Tetratricopeptide repeat protein. (991 aa)
	VDBG_06898	Predicted protein. (259 aa)
	VDBG_08668	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (578 aa)
	VDBG_08945	Uncharacterized protein. (491 aa)
	VDBG_09316	Uncharacterized protein. (414 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00334	VDBG_00343	C9S5F5	C9S5I9	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	FACT complex subunit SPT16.	0.987
VDBG_00334	VDBG_01069	C9S5F5	C9S8Y7	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Cell division control protein.	0.941
VDBG_00334	VDBG_01726	C9S5F5	C9SB67	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Plus3 domain-containing protein.	0.947
VDBG_00334	VDBG_01886	C9S5F5	C9SBP3	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Transcription factor IWS1.	0.999
VDBG_00334	VDBG_04535	C9S5F5	C9SHK3	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Uncharacterized protein.	0.935
VDBG_00334	VDBG_05853	C9S5F5	C9SLS9	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Uncharacterized protein.	0.705
VDBG_00334	VDBG_06895	C9S5F5	C9SPS0	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Tetratricopeptide repeat protein.	0.880
VDBG_00334	VDBG_06898	C9S5F5	C9SPS3	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Predicted protein.	0.962
VDBG_00334	VDBG_08668	C9S5F5	C9SUU3	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]	0.985
VDBG_00334	VDBG_08945	C9S5F5	C9SVM0	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Uncharacterized protein.	0.879
VDBG_00334	VDBG_09316	C9S5F5	C9SWP1	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Uncharacterized protein.	0.780
VDBG_00343	VDBG_00334	C9S5I9	C9S5F5	FACT complex subunit SPT16.	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	0.987
VDBG_00343	VDBG_01069	C9S5I9	C9S8Y7	FACT complex subunit SPT16.	Cell division control protein.	0.998
VDBG_00343	VDBG_01726	C9S5I9	C9SB67	FACT complex subunit SPT16.	Plus3 domain-containing protein.	0.965
VDBG_00343	VDBG_01886	C9S5I9	C9SBP3	FACT complex subunit SPT16.	Transcription factor IWS1.	0.947
VDBG_00343	VDBG_04535	C9S5I9	C9SHK3	FACT complex subunit SPT16.	Uncharacterized protein.	0.989
VDBG_00343	VDBG_05853	C9S5I9	C9SLS9	FACT complex subunit SPT16.	Uncharacterized protein.	0.802
VDBG_00343	VDBG_06895	C9S5I9	C9SPS0	FACT complex subunit SPT16.	Tetratricopeptide repeat protein.	0.957
VDBG_00343	VDBG_06898	C9S5I9	C9SPS3	FACT complex subunit SPT16.	Predicted protein.	0.992
VDBG_00343	VDBG_08668	C9S5I9	C9SUU3	FACT complex subunit SPT16.	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]	0.999