STRINGSTRING
VDBG_00290 VDBG_00290 VDBG_00291 VDBG_00291 VDBG_00448 VDBG_00448 VDBG_00570 VDBG_00570 VDBG_00621 VDBG_00621 VDBG_00851 VDBG_00851 RPS1 RPS1 VDBG_02085 VDBG_02085 VDBG_02135 VDBG_02135 VDBG_01574 VDBG_01574 VDBG_01819 VDBG_01819 VDBG_01982 VDBG_01982 VDBG_01983 VDBG_01983 VDBG_02053 VDBG_02053 VDBG_02062 VDBG_02062 VDBG_03007 VDBG_03007 VDBG_02666 VDBG_02666 VDBG_03852 VDBG_03852 VDBG_03995 VDBG_03995 VDBG_03440 VDBG_03440 VDBG_04112 VDBG_04112 VDBG_03558 VDBG_03558 VDBG_04228 VDBG_04228 VDBG_04277 VDBG_04277 VDBG_03744 VDBG_03744 VDBG_03807 VDBG_03807 VDBG_04754 VDBG_04754 VDBG_04817 VDBG_04817 VDBG_04824 VDBG_04824 VDBG_04948 VDBG_04948 VDBG_05021 VDBG_05021 VDBG_04423 VDBG_04423 VDBG_05257 VDBG_05257 VDBG_05400 VDBG_05400 RPS0 RPS0 VDBG_05575 VDBG_05575 VDBG_05590 VDBG_05590 VDBG_05900 VDBG_05900 VDBG_05969 VDBG_05969 VDBG_06125 VDBG_06125 VDBG_06157 VDBG_06157 VDBG_06610 VDBG_06610 VDBG_06627 VDBG_06627 VDBG_06646 VDBG_06646 VDBG_06698 VDBG_06698 VDBG_06725 VDBG_06725 VDBG_06728 VDBG_06728 VDBG_06880 VDBG_06880 VDBG_06906 VDBG_06906 VDBG_07046 VDBG_07046 VDBG_07050 VDBG_07050 VDBG_07125 VDBG_07125 VDBG_07341 VDBG_07341 VDBG_08252 VDBG_08252 VDBG_08644 VDBG_08644 VDBG_08653 VDBG_08653 VDBG_08717 VDBG_08717 VDBG_08940 VDBG_08940 VDBG_08942 VDBG_08942 VDBG_08943 VDBG_08943 VDBG_09054 VDBG_09054 VDBG_09313 VDBG_09313 VDBG_09323 VDBG_09323 VDBG_09371 VDBG_09371 VDBG_09533 VDBG_09533 VDBG_09814 VDBG_09814 VDBG_09978 VDBG_09978
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_0029060S ribosomal protein L10. (222 aa)
VDBG_0029160S ribosomal protein L30-1. (110 aa)
VDBG_0044840S ribosomal protein S19. (152 aa)
VDBG_0057060S ribosomal protein L22. (126 aa)
VDBG_0062160S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (109 aa)
VDBG_00851Elongation factor 2. (820 aa)
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (247 aa)
VDBG_0208540S ribosomal protein S4-A. (187 aa)
VDBG_0213540S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (136 aa)
VDBG_0157460S ribosomal protein L26-1. (96 aa)
VDBG_0181940S ribosomal protein S27. (82 aa)
VDBG_0198240S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (191 aa)
VDBG_0198360S ribosomal protein L21-A. (160 aa)
VDBG_0205360S ribosomal protein L14-B. (147 aa)
VDBG_0206260S ribosomal protein L24. (160 aa)
VDBG_0300760S ribosomal protein L27-B. (135 aa)
VDBG_0266640S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (201 aa)
VDBG_0385260S ribosomal protein L20. (209 aa)
VDBG_0399540S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (141 aa)
VDBG_0344040S ribosomal protein S20. (116 aa)
VDBG_0411260S ribosomal protein L4. (352 aa)
VDBG_0355840S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (162 aa)
VDBG_04228Uncharacterized protein. (56 aa)
VDBG_0427760S ribosomal protein L5. (299 aa)
VDBG_0374460S ribosomal protein L31. (123 aa)
VDBG_0380740S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (160 aa)
VDBG_0475460S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
VDBG_0481760S ribosomal protein L35. (125 aa)
VDBG_0482460S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
VDBG_0494860S ribosomal protein L33-A. (109 aa)
VDBG_0502160S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (172 aa)
VDBG_0442360S ribosomal protein L9-A. (193 aa)
VDBG_0525740S ribosomal protein S6. (142 aa)
VDBG_0540060S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (391 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (288 aa)
VDBG_0557540S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (207 aa)
VDBG_0559040S ribosomal protein S5-B. (128 aa)
VDBG_0590040S ribosomal protein S13. (156 aa)
VDBG_0596960S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (106 aa)
VDBG_0612560S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
VDBG_0615740S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (155 aa)
VDBG_0661060S ribosomal protein L34. (116 aa)
VDBG_0662740S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
VDBG_0664660S ribosomal protein L32. (131 aa)
VDBG_0669840S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (156 aa)
VDBG_06725Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
VDBG_0672860S ribosomal protein L39. (51 aa)
VDBG_0688060S ribosomal protein L2. (254 aa)
VDBG_0690660S ribosomal protein L7. (262 aa)
VDBG_07046G-protein beta subunit. (316 aa)
VDBG_07050Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (193 aa)
VDBG_07125Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (203 aa)
VDBG_0734140S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (258 aa)
VDBG_0825240S ribosomal protein S17. (148 aa)
VDBG_0864460S ribosomal protein L23a. (157 aa)
VDBG_0865360S ribosomal protein L28. (158 aa)
VDBG_0871740S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (262 aa)
VDBG_0894060S ribosomal protein L43. (92 aa)
VDBG_0894240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (145 aa)
VDBG_0894340S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (94 aa)
VDBG_0905460S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family. (202 aa)
VDBG_0931360S ribosomal protein L8. (261 aa)
VDBG_0932360S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
VDBG_0937160S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (185 aa)
VDBG_0953360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (214 aa)
VDBG_0981460S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. (149 aa)
VDBG_0997860S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (139 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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