STRINGSTRING
VDBG_00605 VDBG_00605 VDBG_00234 VDBG_00234 VDBG_01528 VDBG_01528 VDBG_02877 VDBG_02877 VDBG_04049 VDBG_04049 VDBG_05431 VDBG_05431 VDBG_05855 VDBG_05855 VDBG_05946 VDBG_05946 VDBG_06717 VDBG_06717 VDBG_08974 VDBG_08974 VDBG_10061 VDBG_10061
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00605Prohibitin. (276 aa)
VDBG_00234Paraplegin. (841 aa)
VDBG_01528Cell division protease ftsH. (718 aa)
VDBG_02877MCU domain-containing protein. (525 aa)
VDBG_04049Mitochondrial chaperone BCS1; Belongs to the AAA ATPase family. (637 aa)
VDBG_05431Stomatin-2. (339 aa)
VDBG_05855Prohibitin. (292 aa)
VDBG_05946Uncharacterized protein. (452 aa)
VDBG_06717Zinc finger protein. (224 aa)
VDBG_0897426S protease regulatory subunit 4. (372 aa)
VDBG_10061PHB domain-containing protein. (332 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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