STRINGSTRING
VDBG_01575 VDBG_01575 VDBG_01576 VDBG_01576 VDBG_02449 VDBG_02449 VDBG_01654 VDBG_01654 VDBG_02478 VDBG_02478 VDBG_01829 VDBG_01829 VDBG_02017 VDBG_02017 VDBG_02019 VDBG_02019 VDBG_04316 VDBG_04316 VDBG_04973 VDBG_04973 VDBG_05557 VDBG_05557 VDBG_05840 VDBG_05840 VDBG_05877 VDBG_05877 VDBG_06846 VDBG_06846 VDBG_07103 VDBG_07103 VDBG_07363 VDBG_07363 VDBG_07607 VDBG_07607 VDBG_08042 VDBG_08042
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_01575Cytochrome c oxidase assembly protein COX11. (166 aa)
VDBG_01576Amine oxidase. (211 aa)
VDBG_02449Sulfhydryl oxidase. (200 aa)
VDBG_01654Uncharacterized protein. (133 aa)
VDBG_02478Predicted protein. (124 aa)
VDBG_01829SCO2. (159 aa)
VDBG_02017Predicted protein. (154 aa)
VDBG_02019SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (318 aa)
VDBG_04316Uncharacterized protein. (107 aa)
VDBG_04973COX17 protein. (70 aa)
VDBG_05557Uncharacterized protein. (126 aa)
VDBG_05840Cytochrome c oxidase assembly protein COX19. (108 aa)
VDBG_05877COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family. (83 aa)
VDBG_06846Pumilio domain-containing protein. (852 aa)
VDBG_07103Protoheme IX farnesyltransferase. (295 aa)
VDBG_07363COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family. (173 aa)
VDBG_07607Mitochondrial export translocase Oxa1. (497 aa)
VDBG_08042Electron transfer protein. (446 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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