STRINGSTRING
VDBG_02434 VDBG_02434 VDBG_03177 VDBG_03177 VDBG_05826 VDBG_05826 VDBG_06077 VDBG_06077 VDBG_06478 VDBG_06478 VDBG_07492 VDBG_07492 VDBG_07493 VDBG_07493 VDBG_07651 VDBG_07651 VDBG_09605 VDBG_09605 VDBG_09523 VDBG_09523 VDBG_10044 VDBG_10044
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_02434Alpha-galactosidase. (386 aa)
VDBG_03177Glycosyl hydrolase. (691 aa)
VDBG_05826Alpha-galactosidase; Hydrolyzes a variety of simple alpha-D-galactoside as well as more complex molecules such as oligosaccharides and polysaccharides. Belongs to the glycosyl hydrolase. (747 aa)
VDBG_06077Alpha-galactosidase. (472 aa)
VDBG_06478Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (1020 aa)
VDBG_07492Alpha-galactosidase. (107 aa)
VDBG_07493Alpha-galactosidase. (215 aa)
VDBG_07651Alpha-galactosidase. (501 aa)
VDBG_09605Galactose oxidase. (734 aa)
VDBG_09523Alpha-galactosidase. (402 aa)
VDBG_10044Beta-galactosidase. (1131 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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