STRINGSTRING
VDBG_01392 VDBG_01392 VDBG_01652 VDBG_01652 VDBG_02826 VDBG_02826 VDBG_02592 VDBG_02592 VDBG_03544 VDBG_03544 VDBG_04196 VDBG_04196 VDBG_06485 VDBG_06485 VDBG_07599 VDBG_07599 VDBG_08665 VDBG_08665 VDBG_08796 VDBG_08796
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_01392Uncharacterized protein. (512 aa)
VDBG_01652Myosin-9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2368 aa)
VDBG_02826Alpha-actinin-1. (717 aa)
VDBG_02592Predicted protein. (143 aa)
VDBG_03544GTPase-activating protein. (423 aa)
VDBG_04196Actin lateral binding protein. (161 aa)
VDBG_06485BZIP transcription factor HapX. (507 aa)
VDBG_07599ThiJ/PfpI family protein. (258 aa)
VDBG_08665CRIB domain-containing protein. (787 aa)
VDBG_08796Uncharacterized protein. (285 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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