11 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_00306	Ras-2. (182 aa)
	VDBG_00367	cAMP-dependent protein kinase regulatory subunit. (216 aa)
	VDBG_00397	Uncharacterized protein. (874 aa)
	VDBG_01093	Ras-1. (170 aa)
	VDBG_02174	Protein kinase DC2; Belongs to the protein kinase superfamily. (397 aa)
	VDBG_02648	3',5'-cyclic-nucleotide phosphodiesterase. (551 aa)
	VDBG_04686	Cutinase G-box binding protein. (572 aa)
	VDBG_06063	Serine/threonine-protein kinase ppk18. (1908 aa)
	VDBG_06700	Phosphodiesterase. (849 aa)
	VDBG_08817	cAMP-dependent protein kinase; Belongs to the protein kinase superfamily. (442 aa)
	VDBG_09307	ApbA domain-containing protein. (117 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00306	VDBG_00367	C9S599	C9S5N4	Ras-2.	cAMP-dependent protein kinase regulatory subunit.	0.498
VDBG_00306	VDBG_01093	C9S599	C9S981	Ras-2.	Ras-1.	0.904
VDBG_00306	VDBG_02174	C9S599	C9S9K2	Ras-2.	Protein kinase DC2; Belongs to the protein kinase superfamily.	0.918
VDBG_00306	VDBG_06063	C9S599	C9SMD9	Ras-2.	Serine/threonine-protein kinase ppk18.	0.527
VDBG_00306	VDBG_06700	C9S599	C9SP75	Ras-2.	Phosphodiesterase.	0.419
VDBG_00306	VDBG_08817	C9S599	C9SV92	Ras-2.	cAMP-dependent protein kinase; Belongs to the protein kinase superfamily.	0.935
VDBG_00367	VDBG_00306	C9S5N4	C9S599	cAMP-dependent protein kinase regulatory subunit.	Ras-2.	0.498
VDBG_00367	VDBG_00397	C9S5N4	C9S5R4	cAMP-dependent protein kinase regulatory subunit.	Uncharacterized protein.	0.925
VDBG_00367	VDBG_01093	C9S5N4	C9S981	cAMP-dependent protein kinase regulatory subunit.	Ras-1.	0.498
VDBG_00367	VDBG_02174	C9S5N4	C9S9K2	cAMP-dependent protein kinase regulatory subunit.	Protein kinase DC2; Belongs to the protein kinase superfamily.	0.635
VDBG_00367	VDBG_02648	C9S5N4	C9SEE6	cAMP-dependent protein kinase regulatory subunit.	3',5'-cyclic-nucleotide phosphodiesterase.	0.633
VDBG_00367	VDBG_06063	C9S5N4	C9SMD9	cAMP-dependent protein kinase regulatory subunit.	Serine/threonine-protein kinase ppk18.	0.506
VDBG_00367	VDBG_06700	C9S5N4	C9SP75	cAMP-dependent protein kinase regulatory subunit.	Phosphodiesterase.	0.664
VDBG_00367	VDBG_08817	C9S5N4	C9SV92	cAMP-dependent protein kinase regulatory subunit.	cAMP-dependent protein kinase; Belongs to the protein kinase superfamily.	0.986
VDBG_00367	VDBG_09307	C9S5N4	C9SWN2	cAMP-dependent protein kinase regulatory subunit.	ApbA domain-containing protein.	0.946
VDBG_00397	VDBG_00367	C9S5R4	C9S5N4	Uncharacterized protein.	cAMP-dependent protein kinase regulatory subunit.	0.925
VDBG_00397	VDBG_06700	C9S5R4	C9SP75	Uncharacterized protein.	Phosphodiesterase.	0.771
VDBG_01093	VDBG_00306	C9S981	C9S599	Ras-1.	Ras-2.	0.904
VDBG_01093	VDBG_00367	C9S981	C9S5N4	Ras-1.	cAMP-dependent protein kinase regulatory subunit.	0.498
VDBG_01093	VDBG_02174	C9S981	C9S9K2	Ras-1.	Protein kinase DC2; Belongs to the protein kinase superfamily.	0.918