STRINGSTRING
VDBG_01174 VDBG_01174 VDBG_00638 VDBG_00638 VDBG_01442 VDBG_01442 VDBG_02160 VDBG_02160 VDBG_01664 VDBG_01664 VDBG_01941 VDBG_01941 VDBG_01962 VDBG_01962 VDBG_02746 VDBG_02746 VDBG_02791 VDBG_02791 VDBG_03520 VDBG_03520 VDBG_03622 VDBG_03622 VDBG_04821 VDBG_04821 VDBG_04873 VDBG_04873 VDBG_04947 VDBG_04947 VDBG_04980 VDBG_04980 VDBG_04444 VDBG_04444 VDBG_05192 VDBG_05192 VDBG_05624 VDBG_05624 VDBG_05867 VDBG_05867 VDBG_06314 VDBG_06314 VDBG_06315 VDBG_06315 VDBG_06316 VDBG_06316 VDBG_06828 VDBG_06828 VDBG_07167 VDBG_07167 VDBG_07510 VDBG_07510 VDBG_07609 VDBG_07609 VDBG_07611 VDBG_07611 VDBG_07612 VDBG_07612 VDBG_08209 VDBG_08209 VDBG_08401 VDBG_08401 VDBG_08853 VDBG_08853 VDBG_09018 VDBG_09018 VDBG_09270 VDBG_09270
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_01174Glucose-6-phosphate isomerase; Belongs to the GPI family. (553 aa)
VDBG_00638Transketolase. (591 aa)
VDBG_01442Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (417 aa)
VDBG_02160Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (284 aa)
VDBG_016646-phosphofructokinase. (716 aa)
VDBG_019412-deoxy-D-gluconate 3-dehydrogenase. (260 aa)
VDBG_01962Phosphoglycerate mutase family protein. (242 aa)
VDBG_02746Xylulose-5-phosphate phosphoketolase. (787 aa)
VDBG_02791Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family. (320 aa)
VDBG_03520Uncharacterized protein. (29 aa)
VDBG_036222,3-bisphosphoglycerate-independent phosphoglycerate mutase. (479 aa)
VDBG_04821Gluconokinase; Belongs to the gluconokinase GntK/GntV family. (225 aa)
VDBG_048736-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (507 aa)
VDBG_04947Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (435 aa)
VDBG_04980Transaldolase. (336 aa)
VDBG_04444Ribulose-phosphate 3-epimerase. (214 aa)
VDBG_05192Glyceraldehyde-3-phosphate dehydrogenase. (338 aa)
VDBG_05624Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (286 aa)
VDBG_05867Enolase. (422 aa)
VDBG_06314Ketose-bisphosphate aldolase class-II family protein. (201 aa)
VDBG_06315Ketose-bisphosphate aldolase class-II family protein. (356 aa)
VDBG_06316Oxidoreductase. (126 aa)
VDBG_06828Triosephosphate isomerase. (247 aa)
VDBG_07167Uncharacterized protein. (261 aa)
VDBG_07510Xylulose-5-phosphate phosphoketolase. (342 aa)
VDBG_07609Ribose-5-phosphate isomerase B. (160 aa)
VDBG_07611Triosephosphate isomerase. (260 aa)
VDBG_07612Uncharacterized protein. (571 aa)
VDBG_08209Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (345 aa)
VDBG_08401Ribose-5-phosphate isomerase. (281 aa)
VDBG_088536-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (295 aa)
VDBG_09018Anhydro-N-acetylmuramic acid kinase. (456 aa)
VDBG_09270Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (362 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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