STRINGSTRING
VDBG_01162 VDBG_01162 VDBG_05053 VDBG_05053 VDBG_05806 VDBG_05806 VDBG_07518 VDBG_07518 VDBG_07610 VDBG_07610 VDBG_07776 VDBG_07776
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_01162Dihydroxyacetone synthase. (715 aa)
VDBG_05053Glycerol-3-phosphate dehydrogenase [NAD(+)]. (366 aa)
VDBG_05806Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (693 aa)
VDBG_07518Dihydroxyacetone kinase. (587 aa)
VDBG_07610Dihydroxyacetone kinase. (566 aa)
VDBG_07776Dihydroxyacetone kinase. (566 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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