STRINGSTRING
VDBG_00307 VDBG_00307 VDBG_01158 VDBG_01158 VDBG_00368 VDBG_00368 VDBG_00671 VDBG_00671 VDBG_00784 VDBG_00784 VDBG_00785 VDBG_00785 VDBG_01384 VDBG_01384 VDBG_00997 VDBG_00997 VDBG_00078 VDBG_00078 VDBG_00179 VDBG_00179 VDBG_00225 VDBG_00225 VDBG_00232 VDBG_00232 VDBG_02306 VDBG_02306 VDBG_02437 VDBG_02437 VDBG_01564 VDBG_01564 VDBG_01630 VDBG_01630 VDBG_01631 VDBG_01631 VDBG_01992 VDBG_01992 VDBG_02839 VDBG_02839 VDBG_02989 VDBG_02989 VDBG_02990 VDBG_02990 VDBG_03032 VDBG_03032 VDBG_03059 VDBG_03059 VDBG_03104 VDBG_03104 VDBG_03208 VDBG_03208 VDBG_03210 VDBG_03210 VDBG_03211 VDBG_03211 VDBG_03212 VDBG_03212 VDBG_02617 VDBG_02617 VDBG_02697 VDBG_02697 VDBG_03949 VDBG_03949 VDBG_03950 VDBG_03950 VDBG_03960 VDBG_03960 VDBG_04044 VDBG_04044 VDBG_04057 VDBG_04057 VDBG_03455 VDBG_03455 VDBG_04101 VDBG_04101 VDBG_03478 VDBG_03478 VDBG_03518 VDBG_03518 VDBG_03527 VDBG_03527 VDBG_04297 VDBG_04297 VDBG_03737 VDBG_03737 VDBG_04777 VDBG_04777 VDBG_04329 VDBG_04329 VDBG_04331 VDBG_04331 VDBG_04354 VDBG_04354 VDBG_05776 VDBG_05776 VDBG_05803 VDBG_05803 VDBG_05406 VDBG_05406 VDBG_05516 VDBG_05516 VDBG_05895 VDBG_05895 VDBG_06030 VDBG_06030 VDBG_06067 VDBG_06067 VDBG_06154 VDBG_06154 VDBG_06261 VDBG_06261 VDBG_06377 VDBG_06377 VDBG_06415 VDBG_06415 VDBG_06417 VDBG_06417 VDBG_06418 VDBG_06418 VDBG_06471 VDBG_06471 VDBG_07232 VDBG_07232 VDBG_07402 VDBG_07402 VDBG_07720 VDBG_07720 VDBG_07721 VDBG_07721 VDBG_08104 VDBG_08104 VDBG_08105 VDBG_08105 VDBG_08118 VDBG_08118 VDBG_08135 VDBG_08135 VDBG_08357 VDBG_08357 VDBG_08368 VDBG_08368 VDBG_08481 VDBG_08481 VDBG_08483 VDBG_08483 VDBG_08574 VDBG_08574 VDBG_08607 VDBG_08607 VDBG_08779 VDBG_08779 VDBG_09064 VDBG_09064 VDBG_09607 VDBG_09607 VDBG_09625 VDBG_09625 VDBG_09633 VDBG_09633 VDBG_09450 VDBG_09450 VDBG_09452 VDBG_09452 VDBG_09702 VDBG_09702 VDBG_09790 VDBG_09790
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00307Haloacid dehalogenase. (270 aa)
VDBG_01158Carnitinyl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (285 aa)
VDBG_003684-coumarate-CoA ligase. (163 aa)
VDBG_00671Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (820 aa)
VDBG_00784Peroxisomal hydratase-dehydrogenase-epimerase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (305 aa)
VDBG_00785Peroxisomal hydratase-dehydrogenase-epimerase. (114 aa)
VDBG_01384Acetyl-CoA hydrolase. (526 aa)
VDBG_00997Mitochondrial carnitine carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. (349 aa)
VDBG_00078Trimethyllysine dioxygenase. (441 aa)
VDBG_00179Acyl-CoA dehydrogenase family member 11. (451 aa)
VDBG_00225Uncharacterized protein. (539 aa)
VDBG_002323-hydroxybutyryl-CoA dehydrogenase. (320 aa)
VDBG_02306Methylcrotonoyl-CoA carboxylase subunit alpha. (683 aa)
VDBG_02437Short chain enoyl-CoA hydratase. (230 aa)
VDBG_01564Hydroxymethylglutaryl-CoA lyase. (372 aa)
VDBG_01630Isovaleryl-CoA dehydrogenase. (435 aa)
VDBG_01631Methylcrotonoyl-CoA carboxylase beta chain. (608 aa)
VDBG_01992Hydroxyquinol 1,2-dioxygenase. (337 aa)
VDBG_02839Enoyl-CoA hydratase. (261 aa)
VDBG_02989Acyl-CoA dehydrogenase fadE12. (438 aa)
VDBG_02990Zn(2)-C6 fungal-type domain-containing protein. (506 aa)
VDBG_03032WD repeat-containing protein. (1081 aa)
VDBG_03059Acyl CoA dehydrogenase. (308 aa)
VDBG_03104Mitochondrial methylglutaconyl-CoA hydratase. (388 aa)
VDBG_032084-coumarate-CoA ligase. (744 aa)
VDBG_03210Peroxisomal multifunctional enzyme. (159 aa)
VDBG_03211Carnitinyl-CoA dehydratase. (283 aa)
VDBG_03212Carnitinyl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (279 aa)
VDBG_02617Aldedh domain-containing protein. (452 aa)
VDBG_02697Acyl-CoA synthetases /AMP-acid ligases II. (176 aa)
VDBG_039494-coumarate-CoA ligase. (339 aa)
VDBG_03950AMP-binding domain-containing protein. (104 aa)
VDBG_03960Acyl-CoA dehydrogenase family member 10. (385 aa)
VDBG_04044Homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (442 aa)
VDBG_04057Alpha-methylacyl-CoA racemase. (378 aa)
VDBG_03455Glutaryl-CoA dehydrogenase. (431 aa)
VDBG_04101Acetoacetyl-coenzyme A synthetase. (706 aa)
VDBG_03478Short-chain specific acyl-CoA dehydrogenase. (441 aa)
VDBG_03518Acyl-CoA dehydrogenase. (604 aa)
VDBG_03527Alpha-methylacyl-CoA racemase. (352 aa)
VDBG_04297Thioesterase family protein. (171 aa)
VDBG_03737Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
VDBG_04777AidB. (647 aa)
VDBG_04329Carnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family. (401 aa)
VDBG_04331Electron transfer flavoprotein subunit alpha. (346 aa)
VDBG_04354Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (430 aa)
VDBG_05776Enoyl-CoA hydratase/isomerase family protein. (263 aa)
VDBG_05803Fungal_trans domain-containing protein. (690 aa)
VDBG_05406Acetyl-coenzyme A synthetase. (636 aa)
VDBG_05516Carnitine O-palmitoyltransferase I. (841 aa)
VDBG_05895Acyl-CoA dehydrogenase family member 11. (410 aa)
VDBG_06030Peroxisomal 2,4-dienoyl-CoA reductase SPS19. (317 aa)
VDBG_06067Peroxisomal multifunctional enzyme. (308 aa)
VDBG_06154Uncharacterized protein. (1298 aa)
VDBG_06261Uncharacterized protein. (409 aa)
VDBG_06377Formyl-coenzyme A transferase. (382 aa)
VDBG_064153-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (421 aa)
VDBG_06417Peroxisomal multifunctional enzyme. (217 aa)
VDBG_06418Peroxisomal hydratase-dehydrogenase-epimerase. (632 aa)
VDBG_06471Enoyl-CoA hydratase/isomerase family protein. (309 aa)
VDBG_07232Enoyl-CoA hydratase. (305 aa)
VDBG_07402Homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (379 aa)
VDBG_07720Acetoacetyl-CoA synthase. (139 aa)
VDBG_07721Acetoacetyl-CoA synthase. (194 aa)
VDBG_08104Uncharacterized protein. (688 aa)
VDBG_08105Uncharacterized protein. (379 aa)
VDBG_08118Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (635 aa)
VDBG_081353-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (416 aa)
VDBG_08357Formyl-coenzyme A transferase. (417 aa)
VDBG_08368Enoyl-CoA hydratase. (288 aa)
VDBG_084813-ketoacyl-CoA thiolase. (262 aa)
VDBG_08483Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. (424 aa)
VDBG_08574Hydrogenase maturation factor hoxX. (756 aa)
VDBG_08607Acyl-coenzyme A synthetase ACSM3. (564 aa)
VDBG_08779Predicted protein. (712 aa)
VDBG_09064Uncharacterized protein. (256 aa)
VDBG_09607Uncharacterized protein. (584 aa)
VDBG_096253-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (352 aa)
VDBG_09633Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. (452 aa)
VDBG_09450AdhA. (320 aa)
VDBG_09452Zn(2)-C6 fungal-type domain-containing protein. (724 aa)
VDBG_09702Uncharacterized protein. (488 aa)
VDBG_09790Dibenzothiophene desulfurization enzyme C. (428 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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