(38 nodes) beta-Alanine metabolism, and Alcohol dehydrogenase (NAD+) activity network (Verticillium alfalfae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_00360	Acetyl-coenzyme A synthetase. (608 aa)
	VDBG_00595	S-(Hydroxymethyl)glutathione dehydrogenase. (95 aa)
	VDBG_01286	Uncharacterized protein. (275 aa)
	VDBG_01344	3-hydroxyisobutyrate dehydrogenase. (336 aa)
	VDBG_02333	Polyamine oxidase. (424 aa)
	VDBG_02350	Amine oxidase; Belongs to the copper/topaquinone oxidase family. (680 aa)
	VDBG_01542	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (496 aa)
	VDBG_01731	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (491 aa)
	VDBG_03060	Alcohol dehydrogenase. (357 aa)
	VDBG_02594	Aldehyde dehydrogenase. (377 aa)
	VDBG_03870	Uncharacterized protein. (533 aa)
	VDBG_03952	Alcohol dehydrogenase. (334 aa)
	VDBG_03953	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (504 aa)
	VDBG_04055	Retinol dehydrogenase. (329 aa)
	VDBG_03673	Pyruvate decarboxylase. (524 aa)
	VDBG_04579	Methylmalonate-semialdehyde dehydrogenase. (392 aa)
	VDBG_05141	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (495 aa)
	VDBG_05527	Bifunctional cytochrome P450/NADPH--P450 reductase; In the N-terminal section; belongs to the cytochrome P450 family. (1092 aa)
	VDBG_05565	Alcohol dehydrogenase. (352 aa)
	VDBG_06404	NAD-dependent alcohol dehydrogenase. (295 aa)
	VDBG_07090	Pyruvate decarboxylase. (330 aa)
	VDBG_07225	Succinate-semialdehyde dehydrogenase. (585 aa)
	VDBG_07926	Ethanolamine utilization protein eutG. (448 aa)
	VDBG_08437	Alcohol dehydrogenase. (347 aa)
	VDBG_08523	Glutamate decarboxylase. (464 aa)
	VDBG_08567	Glycerate kinase. (344 aa)
	VDBG_08619	Catechol O-methyltransferase. (271 aa)
	VDBG_08711	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (503 aa)
	VDBG_08713	Amine oxidase. (702 aa)
	VDBG_08737	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (316 aa)
	VDBG_09036	Amine oxidase. (683 aa)
	VDBG_09103	Amine oxidase. (538 aa)
	VDBG_09164	Amine oxidase. (624 aa)
	VDBG_09176	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (498 aa)
	VDBG_09333	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (421 aa)
	VDBG_09435	Amine oxidase. (368 aa)
	VDBG_09458	N-benzyl-3-pyrrolidinol dehydrogenase. (350 aa)
	VDBG_09704	Pyruvate decarboxylase. (555 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00360	VDBG_01344	C9S5M7	C9S7D9	Acetyl-coenzyme A synthetase.	3-hydroxyisobutyrate dehydrogenase.	0.805
VDBG_00360	VDBG_01542	C9S5M7	C9SAI5	Acetyl-coenzyme A synthetase.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.886
VDBG_00360	VDBG_02594	C9S5M7	C9SE76	Acetyl-coenzyme A synthetase.	Aldehyde dehydrogenase.	0.886
VDBG_00360	VDBG_03870	C9S5M7	C9SEX5	Acetyl-coenzyme A synthetase.	Uncharacterized protein.	0.465
VDBG_00360	VDBG_03953	C9S5M7	C9SF58	Acetyl-coenzyme A synthetase.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.886
VDBG_00360	VDBG_04579	C9S5M7	C9SHP7	Acetyl-coenzyme A synthetase.	Methylmalonate-semialdehyde dehydrogenase.	0.916
VDBG_00360	VDBG_05141	C9S5M7	C9SK14	Acetyl-coenzyme A synthetase.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.886
VDBG_00360	VDBG_07225	C9S5M7	C9SQJ0	Acetyl-coenzyme A synthetase.	Succinate-semialdehyde dehydrogenase.	0.442
VDBG_00360	VDBG_07926	C9S5M7	C9SSQ1	Acetyl-coenzyme A synthetase.	Ethanolamine utilization protein eutG.	0.452
VDBG_00360	VDBG_08711	C9S5M7	C9SUY6	Acetyl-coenzyme A synthetase.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.886
VDBG_00360	VDBG_08737	C9S5M7	C9SV12	Acetyl-coenzyme A synthetase.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.813
VDBG_00360	VDBG_09176	C9S5M7	C9SWA1	Acetyl-coenzyme A synthetase.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.886
VDBG_00360	VDBG_09333	C9S5M7	C9SX33	Acetyl-coenzyme A synthetase.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.813
VDBG_00595	VDBG_07926	C9S6J6	C9SSQ1	S-(Hydroxymethyl)glutathione dehydrogenase.	Ethanolamine utilization protein eutG.	0.989
VDBG_00595	VDBG_08437	C9S6J6	C9SU16	S-(Hydroxymethyl)glutathione dehydrogenase.	Alcohol dehydrogenase.	0.948
VDBG_01286	VDBG_03060	C9S6S4	C9SCY6	Uncharacterized protein.	Alcohol dehydrogenase.	0.909
VDBG_01286	VDBG_03952	C9S6S4	C9SF57	Uncharacterized protein.	Alcohol dehydrogenase.	0.909
VDBG_01286	VDBG_04055	C9S6S4	C9SFG0	Uncharacterized protein.	Retinol dehydrogenase.	0.901
VDBG_01286	VDBG_05565	C9S6S4	C9SL88	Uncharacterized protein.	Alcohol dehydrogenase.	0.909
VDBG_01286	VDBG_06404	C9S6S4	C9SNC9	Uncharacterized protein.	NAD-dependent alcohol dehydrogenase.	0.909