STRINGSTRING
VDBG_06761 VDBG_06761 VDBG_06469 VDBG_06469 VDBG_05259 VDBG_05259 VDBG_04412 VDBG_04412 VDBG_04825 VDBG_04825 VDBG_04755 VDBG_04755 VDBG_04733 VDBG_04733 VDBG_04619 VDBG_04619 VDBG_04618 VDBG_04618 MDM12 MDM12 VDBG_03075 VDBG_03075 VDBG_01953 VDBG_01953 VDBG_00030 VDBG_00030 VDBG_00746 VDBG_00746 VDBG_00302 VDBG_00302 MDM10 MDM10 VDBG_10215 VDBG_10215 VDBG_10118 VDBG_10118 VDBG_10015 VDBG_10015 VDBG_09200 VDBG_09200 VDBG_08998 VDBG_08998 VDBG_08918 VDBG_08918 VDBG_08678 VDBG_08678 VDBG_08635 VDBG_08635 MMM1 MMM1 VDBG_08311 VDBG_08311 VDBG_06836 VDBG_06836
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_06761Uncharacterized protein. (271 aa)
VDBG_06469UV-damage endonuclease. (658 aa)
VDBG_05259RNA12. (856 aa)
VDBG_04412Chaperone protein dnaJ. (549 aa)
VDBG_04825Heat shock protein. (744 aa)
VDBG_04755DNA mismatch repair protein mutS. (946 aa)
VDBG_04733Predicted protein. (278 aa)
VDBG_04619DNA polymerase IV. (563 aa)
VDBG_04618MUS42. (171 aa)
MDM12Mitochondrial distribution and morphology protein 12; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM12 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10. The MDM12-MMM1 subcomplex functions in the major beta-barrel assembly pat [...] (465 aa)
VDBG_03075DNA ligase. (708 aa)
VDBG_01953Mitochondrial carrier protein RIM2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (389 aa)
VDBG_00030Msp1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (893 aa)
VDBG_00746Uncharacterized protein. (532 aa)
VDBG_00302Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family. (378 aa)
MDM10Mitochondrial distribution and morphology protein 10; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis and may function in phospholipid exchange. MDM10 is involved in the late assembly steps of the general translocase of the mitochondrial outer membrane (TOM complex). Functions in the TOM40-specific route of the assembly of outer membrane beta-barrel proteins, including the association of TOM40 with the recepto [...] (468 aa)
VDBG_10215ATP-dependent DNA helicase; Belongs to the helicase family. (608 aa)
VDBG_10118Protein kinase domain-containing protein. (731 aa)
VDBG_10015Mitochondrial import inner membrane translocase subunit tim-17. (155 aa)
VDBG_09200Mitochondrial genome maintenance protein mgm101. (293 aa)
VDBG_08998Protein kinase domain-containing protein. (522 aa)
VDBG_08918Mitochondrial outer membrane protein involved in mitochondrial shape. (440 aa)
VDBG_08678Uncharacterized protein. (138 aa)
VDBG_08635Cardiolipin synthetase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (294 aa)
MMM1Maintenance of mitochondrial morphology protein 1; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. The MDM12-MMM1 subcomplex functions in the major beta-barrel assembly pathway that is responsible for biogenesis of all outer membrane beta- barrel proteins, and acts in a late step after the SAM complex. The MDM10-MDM12-MMM1 su [...] (393 aa)
VDBG_08311ATP-dependent RNA helicase SUV3. (695 aa)
VDBG_06836DNA polymerase gamma. (963 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
Server load: low (12%) [HD]