23 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_07967	26S proteasome non-ATPase regulatory subunit 6. (79 aa)
	VDBG_09515	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (439 aa)
	VDBG_08295	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (884 aa)
	VDBG_07966	Uncharacterized protein. (270 aa)
	VDBG_07459	26S proteasome regulatory subunit rpn12. (286 aa)
	VDBG_07437	26S proteasome regulatory subunit RPN9. (382 aa)
	VDBG_07295	Uncharacterized protein. (313 aa)
	VDBG_07294	26S proteasome regulatory subunit rpn11. (336 aa)
	VDBG_07100	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (857 aa)
	VDBG_06182	AAA domain-containing protein. (678 aa)
	VDBG_05506	Proteasome 19S regulatory particle. (93 aa)
	VDBG_05387	26S proteasome non-ATPase regulatory subunit 11. (402 aa)
	VDBG_05129	26S proteasome non-ATPase regulatory subunit 4. (268 aa)
	VDBG_04905	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (439 aa)
	VDBG_04830	Uncharacterized protein. (570 aa)
	VDBG_04729	26S protease regulatory subunit S10B; Belongs to the AAA ATPase family. (361 aa)
	VDBG_03629	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (421 aa)
	VDBG_03610	26S proteasome non-ATPase regulatory subunit 3. (553 aa)
	VDBG_01411	26S protease regulatory subunit 6A-B. (231 aa)
	VDBG_01441	Predicted protein. (92 aa)
	VDBG_02265	26S proteasome regulatory subunit RPN5. (492 aa)
	VDBG_01963	Ubiquitin carboxyl-terminal hydrolase. (541 aa)
	VDBG_03999	26S proteasome regulatory subunit rpn-8. (351 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_01411	VDBG_01441	C9S812	C9S882	26S protease regulatory subunit 6A-B.	Predicted protein.	0.944
VDBG_01411	VDBG_01963	C9S812	C9SBX0	26S protease regulatory subunit 6A-B.	Ubiquitin carboxyl-terminal hydrolase.	0.999
VDBG_01411	VDBG_02265	C9S812	C9S9U3	26S protease regulatory subunit 6A-B.	26S proteasome regulatory subunit RPN5.	0.999
VDBG_01411	VDBG_03610	C9S812	C9SGG1	26S protease regulatory subunit 6A-B.	26S proteasome non-ATPase regulatory subunit 3.	0.955
VDBG_01411	VDBG_03629	C9S812	C9SGK3	26S protease regulatory subunit 6A-B.	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	0.999
VDBG_01411	VDBG_03999	C9S812	C9SFA4	26S protease regulatory subunit 6A-B.	26S proteasome regulatory subunit rpn-8.	0.999
VDBG_01411	VDBG_04729	C9S812	C9SI47	26S protease regulatory subunit 6A-B.	26S protease regulatory subunit S10B; Belongs to the AAA ATPase family.	0.999
VDBG_01411	VDBG_04830	C9S812	C9SIE8	26S protease regulatory subunit 6A-B.	Uncharacterized protein.	0.997
VDBG_01411	VDBG_04905	C9S812	C9SIM3	26S protease regulatory subunit 6A-B.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.999
VDBG_01411	VDBG_05129	C9S812	C9SK02	26S protease regulatory subunit 6A-B.	26S proteasome non-ATPase regulatory subunit 4.	0.999
VDBG_01411	VDBG_05387	C9S812	C9SKR0	26S protease regulatory subunit 6A-B.	26S proteasome non-ATPase regulatory subunit 11.	0.999
VDBG_01411	VDBG_05506	C9S812	C9SL29	26S protease regulatory subunit 6A-B.	Proteasome 19S regulatory particle.	0.999
VDBG_01411	VDBG_06182	C9S812	C9SMQ8	26S protease regulatory subunit 6A-B.	AAA domain-containing protein.	0.991
VDBG_01411	VDBG_07100	C9S812	C9SQ65	26S protease regulatory subunit 6A-B.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
VDBG_01411	VDBG_07294	C9S812	C9SQQ9	26S protease regulatory subunit 6A-B.	26S proteasome regulatory subunit rpn11.	0.998
VDBG_01411	VDBG_07295	C9S812	C9SQR0	26S protease regulatory subunit 6A-B.	Uncharacterized protein.	0.992
VDBG_01411	VDBG_07437	C9S812	C9SRB2	26S protease regulatory subunit 6A-B.	26S proteasome regulatory subunit RPN9.	0.999
VDBG_01411	VDBG_07459	C9S812	C9SRD4	26S protease regulatory subunit 6A-B.	26S proteasome regulatory subunit rpn12.	0.999
VDBG_01411	VDBG_07966	C9S812	C9SSU1	26S protease regulatory subunit 6A-B.	Uncharacterized protein.	0.985
VDBG_01411	VDBG_07967	C9S812	C9SSU2	26S protease regulatory subunit 6A-B.	26S proteasome non-ATPase regulatory subunit 6.	0.985