STRINGSTRING
VDBG_01917 VDBG_01917 VDBG_06213 VDBG_06213 VDBG_06446 VDBG_06446 VDBG_06626 VDBG_06626 VDBG_06729 VDBG_06729 VDBG_06744 VDBG_06744 VDBG_06783 VDBG_06783 VDBG_07140 VDBG_07140 VDBG_07830 VDBG_07830 VDBG_07951 VDBG_07951 VDBG_08046 VDBG_08046 VDBG_08324 VDBG_08324 VDBG_08340 VDBG_08340 VDBG_08551 VDBG_08551 VDBG_08647 VDBG_08647 VDBG_08970 VDBG_08970 VDBG_09282 VDBG_09282 VDBG_09354 VDBG_09354 VDBG_09427 VDBG_09427 VDBG_09743 VDBG_09743 VDBG_09831 VDBG_09831 VDBG_09934 VDBG_09934 VDBG_10062 VDBG_10062 VDBG_10063 VDBG_10063 VDBG_10196 VDBG_10196 VDBG_00241 VDBG_00241 VDBG_00264 VDBG_00264 VDBG_01172 VDBG_01172 VDBG_00464 VDBG_00464 VDBG_00471 VDBG_00471 VDBG_00559 VDBG_00559 VDBG_00633 VDBG_00633 VDBG_00669 VDBG_00669 VDBG_00749 VDBG_00749 VDBG_01339 VDBG_01339 VDBG_01357 VDBG_01357 VDBG_00929 VDBG_00929 VDBG_01418 VDBG_01418 VDBG_01030 VDBG_01030 VDBG_01055 VDBG_01055 VDBG_01056 VDBG_01056 VDBG_00141 VDBG_00141 VDBG_02133 VDBG_02133 VDBG_01577 VDBG_01577 VDBG_01677 VDBG_01677 VDBG_01760 VDBG_01760 VDBG_02850 VDBG_02850 VDBG_02863 VDBG_02863 VDBG_03269 VDBG_03269 VDBG_03272 VDBG_03272 VDBG_02554 VDBG_02554 VDBG_02654 VDBG_02654 VDBG_03865 VDBG_03865 VDBG_04007 VDBG_04007 VDBG_04054 VDBG_04054 VDBG_03430 VDBG_03430 VDBG_03495 VDBG_03495 VDBG_04188 VDBG_04188 VDBG_04270 VDBG_04270 VDBG_03677 VDBG_03677 VDBG_04313 VDBG_04313 VDBG_03778 VDBG_03778 VDBG_05758 VDBG_05758 VDBG_05093 VDBG_05093 VDBG_05235 VDBG_05235 VDBG_05442 VDBG_05442 VDBG_05556 VDBG_05556 VDBG_05731 VDBG_05731 VDBG_05883 VDBG_05883
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_01917Uncharacterized protein. (205 aa)
VDBG_06213Glutamate carboxypeptidase. (815 aa)
VDBG_06446AP-1 complex subunit mu-1-I; Belongs to the adaptor complexes medium subunit family. (434 aa)
VDBG_06626Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (262 aa)
VDBG_06729ADP-ribosylation factor 1. (133 aa)
VDBG_06744Vacuolar protein sorting-associated protein. (246 aa)
VDBG_06783V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (174 aa)
VDBG_07140Vacuolar transporter chaperone 2. (759 aa)
VDBG_07830DOA4-independent degradation protein. (201 aa)
VDBG_07951Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (685 aa)
VDBG_08046Vacuolar protein-sorting-associated protein. (161 aa)
VDBG_08324Uncharacterized protein. (361 aa)
VDBG_08340Uncharacterized protein. (252 aa)
VDBG_08551VAC1 protein. (675 aa)
VDBG_08647Vacuolar amino acid transporter 1. (315 aa)
VDBG_08970Vacuolar protein sorting-associated protein; May be involved in recycling of membrane proteins between an endocytic compartment and the TGN; Belongs to the VPS13 family. (3110 aa)
VDBG_09282Class E vacuolar protein-sorting machinery protein HSE1. (690 aa)
VDBG_09354AP-1 complex subunit gamma. (837 aa)
VDBG_09427Endosome protein. (354 aa)
VDBG_09743VHS domain-containing protein. (106 aa)
VDBG_09831Metal homeostatis protein BSD2. (331 aa)
VDBG_09934Vta1 domain-containing protein. (253 aa)
VDBG_10062Ubiquitin-conjugating enzyme variant MMS2. (140 aa)
VDBG_10063Uncharacterized protein. (1698 aa)
VDBG_10196Vacuolar protein sorting-associated protein. (441 aa)
VDBG_00241Vacuolar protein sorting-associated protein. (925 aa)
VDBG_00264AP-1 complex subunit sigma-1. (157 aa)
VDBG_01172Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (837 aa)
VDBG_00464E3 ubiquitin-protein ligase. (791 aa)
VDBG_00471Vacuolar transporter chaperone 1. (133 aa)
VDBG_00559Vacuolar-sorting protein snf7. (223 aa)
VDBG_00633V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (161 aa)
VDBG_00669ZZ type zinc finger domain-containing protein. (849 aa)
VDBG_00749Vps52 / Sac2 family protein. (672 aa)
VDBG_01339Uncharacterized protein. (111 aa)
VDBG_01357Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (693 aa)
VDBG_00929Phosphoinositide 3-kinase regulatory subunit 4. (1521 aa)
VDBG_01418Uncharacterized protein. (296 aa)
VDBG_01030DUF292 domain-containing protein. (302 aa)
VDBG_01055UBIQUITIN_CONJUGAT_2 domain-containing protein. (352 aa)
VDBG_01056Predicted protein. (238 aa)
VDBG_00141Vacuolar protein sorting-associated protein. (170 aa)
VDBG_02133Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (389 aa)
VDBG_01577Vesicle transport v-SNARE protein. (230 aa)
VDBG_01677Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (171 aa)
VDBG_01760Chitin biosynthesis protein CHS5. (166 aa)
VDBG_02850Uncharacterized protein. (176 aa)
VDBG_02863Charged multivesicular body protein. (214 aa)
VDBG_03269Vacuolar protein sorting-associated protein; Belongs to the AAA ATPase family. (404 aa)
VDBG_03272STAM-binding protein. (534 aa)
VDBG_02554Uncharacterized protein. (344 aa)
VDBG_02654V-SNARE. (284 aa)
VDBG_03865Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (238 aa)
VDBG_04007V-SNARE. (284 aa)
VDBG_04054Vacuolar protein sorting-associated protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (811 aa)
VDBG_03430Vacuolar protein sorting 41. (1319 aa)
VDBG_03495Vacuolar protein-sorting-associated protein. (541 aa)
VDBG_04188AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane. (971 aa)
VDBG_04270Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (294 aa)
VDBG_03677Charged multivesicular body protein. (198 aa)
VDBG_04313ESCRT-I component. (525 aa)
VDBG_03778Uncharacterized protein. (408 aa)
VDBG_05758Vacuolar membrane protein. (802 aa)
VDBG_05093Uncharacterized protein. (327 aa)
VDBG_05235Vacuolar protein-sorting-associated protein. (228 aa)
VDBG_05442V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family. (365 aa)
VDBG_05556SNARE domain-containing protein; Belongs to the syntaxin family. (264 aa)
VDBG_05731AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (189 aa)
VDBG_05883Vacuolar fusion protein MON1. (598 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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