STRINGSTRING
VDBG_09650 VDBG_09650 VDBG_05999 VDBG_05999 VDBG_05367 VDBG_05367 VDBG_04246 VDBG_04246 VDBG_04123 VDBG_04123 VDBG_02457 VDBG_02457 VDBG_01597 VDBG_01597 VDBG_01596 VDBG_01596 VDBG_00202 VDBG_00202 VDBG_00770 VDBG_00770
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_09650Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2442 aa)
VDBG_05999Tyrosine-protein phosphatase CDC14. (642 aa)
VDBG_05367Protein phosphatase 1K. (116 aa)
VDBG_04246Protein-serine/threonine kinase. (89 aa)
VDBG_04123UPF0029 domain-containing protein. (272 aa)
VDBG_02457Uncharacterized protein. (165 aa)
VDBG_01597Uncharacterized protein. (388 aa)
VDBG_01596Uncharacterized protein. (280 aa)
VDBG_00202Serine/threonine-protein kinase gcn2. (1616 aa)
VDBG_00770Protein-serine/threonine kinase. (454 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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