(8 nodes) Eukaryotic translation initiation factor 4F complex network (Verticillium alfalfae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_02739	Uncharacterized protein. (1185 aa)
	VDBG_07011	Eukaryotic initiation factor 4F subunit p130. (1349 aa)
	VDBG_05990	Uncharacterized protein. (418 aa)
	VDBG_04187	Uncharacterized protein. (522 aa)
	VDBG_04105	Eukaryotic translation initiation factor 4E-4; Belongs to the eukaryotic initiation factor 4E family. (360 aa)
	VDBG_03871	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. (255 aa)
	VDBG_02599	Uncharacterized protein. (403 aa)
	VDBG_02655	Uncharacterized protein. (721 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_02599	VDBG_03871	C9SE97	C9SEX6	Uncharacterized protein.	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	0.639
VDBG_02655	VDBG_03871	C9SEF3	C9SEX6	Uncharacterized protein.	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	0.639
VDBG_02739	VDBG_03871	C9SEN7	C9SEX6	Uncharacterized protein.	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	0.639
VDBG_03871	VDBG_02599	C9SEX6	C9SE97	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.639
VDBG_03871	VDBG_02655	C9SEX6	C9SEF3	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.639
VDBG_03871	VDBG_02739	C9SEX6	C9SEN7	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.639
VDBG_03871	VDBG_04105	C9SEX6	C9SFQ1	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	Eukaryotic translation initiation factor 4E-4; Belongs to the eukaryotic initiation factor 4E family.	0.910
VDBG_03871	VDBG_04187	C9SEX6	C9SG64	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.639
VDBG_03871	VDBG_05990	C9SEX6	C9SM66	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	Uncharacterized protein.	0.965
VDBG_03871	VDBG_07011	C9SEX6	C9SPX6	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	Eukaryotic initiation factor 4F subunit p130.	0.996
VDBG_04105	VDBG_03871	C9SFQ1	C9SEX6	Eukaryotic translation initiation factor 4E-4; Belongs to the eukaryotic initiation factor 4E family.	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	0.910
VDBG_04105	VDBG_07011	C9SFQ1	C9SPX6	Eukaryotic translation initiation factor 4E-4; Belongs to the eukaryotic initiation factor 4E family.	Eukaryotic initiation factor 4F subunit p130.	0.920
VDBG_04187	VDBG_03871	C9SG64	C9SEX6	Uncharacterized protein.	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	0.639
VDBG_05990	VDBG_03871	C9SM66	C9SEX6	Uncharacterized protein.	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	0.965
VDBG_07011	VDBG_03871	C9SPX6	C9SEX6	Eukaryotic initiation factor 4F subunit p130.	Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.	0.996
VDBG_07011	VDBG_04105	C9SPX6	C9SFQ1	Eukaryotic initiation factor 4F subunit p130.	Eukaryotic translation initiation factor 4E-4; Belongs to the eukaryotic initiation factor 4E family.	0.920