45 items (Verticillium alfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_04758	Serine/threonine-protein kinase. (299 aa)
	VDBG_10198	Mitochondrial-processing peptidase subunit alpha. (482 aa)
	VDBG_10161	Subtilisin Carlsberg. (557 aa)
	VDBG_10130	Uncharacterized protein. (337 aa)
	VDBG_09475	Predicted protein. (305 aa)
	VDBG_09474	Predicted protein. (280 aa)
	PSD1	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily. (525 aa)
	VDBG_09325	UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase. (234 aa)
	VDBG_09324	UDP-N-acetylglucosaminyltransferase. (1133 aa)
	VDBG_09016	Subtilisin BPN. (424 aa)
	VDBG_08640	Microsomal signal peptidase 12kDa subunit. (99 aa)
	VDBG_08631	CAAX prenyl protease. (303 aa)
	VDBG_08435	Serin endopeptidase; Belongs to the peptidase S8 family. (850 aa)
	VDBG_08284	Lon protease homolog; Belongs to the peptidase S16 family. (852 aa)
	VDBG_08169	Xaa-Pro aminopeptidase. (347 aa)
	VDBG_07757	Alkaline elastase YaB; Belongs to the peptidase S8 family. (1247 aa)
	VDBG_07705	Predicted protein. (151 aa)
	VDBG_07545	Mitochondrial inner membrane protease subunit. (177 aa)
	VDBG_07237	Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family. (473 aa)
	VDBG_06805	DUF788 domain-containing protein. (162 aa)
	VDBG_06771	FAD binding domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family. (510 aa)
	VDBG_06426	Endothelin-converting enzyme. (741 aa)
	VDBG_06120	Uncharacterized protein. (223 aa)
	VDBG_05946	Uncharacterized protein. (452 aa)
	VDBG_05563	Threonine aspartase. (514 aa)
	VDBG_05485	Carboxypeptidase. (514 aa)
	VDBG_05236	Carboxypeptidase. (529 aa)
	VDBG_04637	DUF1746 domain-containing protein. (350 aa)
	VDBG_03817	Kexin. (825 aa)
	VDBG_03681	SprT-like domain-containing protein. (476 aa)
	VDBG_04273	C2 domain-containing protein. (687 aa)
	VDBG_04272	Predicted protein. (116 aa)
	VDBG_04161	Uncharacterized protein. (173 aa)
	VDBG_04066	Predicted protein. (234 aa)
	VDBG_03905	Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (401 aa)
	VDBG_03358	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (371 aa)
	VDBG_03197	Predicted protein. (144 aa)
	VDBG_03086	Cytochrome c oxidase assembly protein COX20, mitochondrial; Involved in the assembly of the cytochrome c oxidase complex. Belongs to the COX20 family. (214 aa)
	VDBG_01950	Neprilysin-1. (313 aa)
	VDBG_01636	Signal peptide peptidase family protein. (580 aa)
	VDBG_01623	Mitochondrial inner membrane protease subunit 2. (175 aa)
	VDBG_00234	Paraplegin. (841 aa)
	VDBG_01460	Uncharacterized protein. (301 aa)
	SEC11	Signal peptidase complex catalytic subunit SEC11; Catalytic component of the signal peptidase complex (SPC), which catalyzes the cleavage of N-terminal signal sequences of proteins targeted to the endoplasmic reticulum. Signal peptide cleavage occurs during the translocation (cotranslationally or post-translationally) through the translocon pore into the endoplasmic reticulum (By similarity). (172 aa)
	VDBG_00723	Uncharacterized protein. (1481 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PSD1	VDBG_04272	C9SXE3	C9SGR9	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.	Predicted protein.	0.664
PSD1	VDBG_04273	C9SXE3	C9SGS0	Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.	C2 domain-containing protein.	0.982
SEC11	VDBG_04161	C9S8G0	C9SFV7	Signal peptidase complex catalytic subunit SEC11; Catalytic component of the signal peptidase complex (SPC), which catalyzes the cleavage of N-terminal signal sequences of proteins targeted to the endoplasmic reticulum. Signal peptide cleavage occurs during the translocation (cotranslationally or post-translationally) through the translocon pore into the endoplasmic reticulum (By similarity).	Uncharacterized protein.	0.920
SEC11	VDBG_06120	C9S8G0	C9SMJ6	Signal peptidase complex catalytic subunit SEC11; Catalytic component of the signal peptidase complex (SPC), which catalyzes the cleavage of N-terminal signal sequences of proteins targeted to the endoplasmic reticulum. Signal peptide cleavage occurs during the translocation (cotranslationally or post-translationally) through the translocon pore into the endoplasmic reticulum (By similarity).	Uncharacterized protein.	0.931
SEC11	VDBG_08640	C9S8G0	C9SUR5	Signal peptidase complex catalytic subunit SEC11; Catalytic component of the signal peptidase complex (SPC), which catalyzes the cleavage of N-terminal signal sequences of proteins targeted to the endoplasmic reticulum. Signal peptide cleavage occurs during the translocation (cotranslationally or post-translationally) through the translocon pore into the endoplasmic reticulum (By similarity).	Microsomal signal peptidase 12kDa subunit.	0.920
VDBG_00234	VDBG_05946	C9S979	C9SM22	Paraplegin.	Uncharacterized protein.	0.672
VDBG_00234	VDBG_07237	C9S979	C9SQK2	Paraplegin.	Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	0.805
VDBG_00234	VDBG_08169	C9S979	C9STE4	Paraplegin.	Xaa-Pro aminopeptidase.	0.430
VDBG_00234	VDBG_08284	C9S979	C9STL3	Paraplegin.	Lon protease homolog; Belongs to the peptidase S16 family.	0.647
VDBG_00234	VDBG_10198	C9S979	C9SZ73	Paraplegin.	Mitochondrial-processing peptidase subunit alpha.	0.821
VDBG_01460	VDBG_04161	C9S8G1	C9SFV7	Uncharacterized protein.	Uncharacterized protein.	0.843
VDBG_01460	VDBG_06120	C9S8G1	C9SMJ6	Uncharacterized protein.	Uncharacterized protein.	0.872
VDBG_01460	VDBG_08640	C9S8G1	C9SUR5	Uncharacterized protein.	Microsomal signal peptidase 12kDa subunit.	0.844
VDBG_01623	VDBG_04161	C9SAU0	C9SFV7	Mitochondrial inner membrane protease subunit 2.	Uncharacterized protein.	0.604
VDBG_01623	VDBG_06120	C9SAU0	C9SMJ6	Mitochondrial inner membrane protease subunit 2.	Uncharacterized protein.	0.516
VDBG_01623	VDBG_08640	C9SAU0	C9SUR5	Mitochondrial inner membrane protease subunit 2.	Microsomal signal peptidase 12kDa subunit.	0.611
VDBG_01636	VDBG_08640	C9SAV3	C9SUR5	Signal peptide peptidase family protein.	Microsomal signal peptidase 12kDa subunit.	0.506
VDBG_03197	VDBG_04161	C9SDD6	C9SFV7	Predicted protein.	Uncharacterized protein.	0.718
VDBG_03197	VDBG_06120	C9SDD6	C9SMJ6	Predicted protein.	Uncharacterized protein.	0.665
VDBG_03197	VDBG_08640	C9SDD6	C9SUR5	Predicted protein.	Microsomal signal peptidase 12kDa subunit.	0.728