STRINGSTRING
VDBG_01564 VDBG_01564 VDBG_01731 VDBG_01731 VDBG_01853 VDBG_01853 VDBG_02883 VDBG_02883 VDBG_02623 VDBG_02623 VDBG_03157 VDBG_03157 VDBG_03325 VDBG_03325 VDBG_00323 VDBG_00323 VDBG_00410 VDBG_00410 VDBG_00479 VDBG_00479 VDBG_00577 VDBG_00577 VDBG_00666 VDBG_00666 VDBG_00705 VDBG_00705 VDBG_00924 VDBG_00924 VDBG_00979 VDBG_00979 VDBG_00212 VDBG_00212 VDBG_02298 VDBG_02298 VDBG_02299 VDBG_02299 VDBG_09973 VDBG_09973 VDBG_09707 VDBG_09707 VDBG_09704 VDBG_09704 VDBG_09508 VDBG_09508 VDBG_08524 VDBG_08524 PSD1 PSD1 VDBG_09557 VDBG_09557 VDBG_09289 VDBG_09289 VDBG_09270 VDBG_09270 VDBG_08573 VDBG_08573 VDBG_10090 VDBG_10090 VDBG_09992 VDBG_09992 VDBG_06316 VDBG_06316 VDBG_06431 VDBG_06431 VDBG_06681 VDBG_06681 VDBG_06716 VDBG_06716 VDBG_07090 VDBG_07090 VDBG_07379 VDBG_07379 VDBG_07509 VDBG_07509 VDBG_07510 VDBG_07510 VDBG_07530 VDBG_07530 VDBG_07621 VDBG_07621 VDBG_08054 VDBG_08054 VDBG_08068 VDBG_08068 VDBG_08158 VDBG_08158 VDBG_08323 VDBG_08323 VDBG_08523 VDBG_08523 VDBG_06315 VDBG_06315 VDBG_06096 VDBG_06096 VDBG_05875 VDBG_05875 VDBG_05624 VDBG_05624 VDBG_05398 VDBG_05398 VDBG_05363 VDBG_05363 VDBG_05362 VDBG_05362 VDBG_05290 VDBG_05290 VDBG_05072 VDBG_05072 VDBG_04892 VDBG_04892 VDBG_04494 VDBG_04494 VDBG_03673 VDBG_03673 VDBG_04273 VDBG_04273 VDBG_04040 VDBG_04040 VDBG_02769 VDBG_02769 VDBG_02746 VDBG_02746 VDBG_02402 VDBG_02402
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_01564Hydroxymethylglutaryl-CoA lyase. (372 aa)
VDBG_01731Glutamate decarboxylase; Belongs to the group II decarboxylase family. (491 aa)
VDBG_01853Dihydrodipicolinate synthase; Belongs to the DapA family. (330 aa)
VDBG_02883Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. (412 aa)
VDBG_02623Uracil-5-carboxylate decarboxylase; Belongs to the metallo-dependent hydrolases superfamily. (378 aa)
VDBG_03157TRI14. (345 aa)
VDBG_03325Dihydrodipicolinate synthase; Belongs to the DapA family. (310 aa)
VDBG_00323Isocitrate lyase. (546 aa)
VDBG_00410Imidazole glycerol phosphate synthase hisHF. (329 aa)
VDBG_00479Oxalate decarboxylase oxdC. (320 aa)
VDBG_00577Pyridoxal-dependent decarboxylase. (309 aa)
VDBG_00666Uncharacterized protein. (235 aa)
VDBG_00705Cryptochrome DASH. (703 aa)
VDBG_00924tRNA wybutosine-synthesizing protein. (762 aa)
VDBG_00979Folic acid synthesis protein. (564 aa)
VDBG_00212Dihydrodipicolinate synthase; Belongs to the DapA family. (293 aa)
VDBG_02298Mitochondrial 2-methylisocitrate lyase. (108 aa)
VDBG_02299Isocitrate lyase. (474 aa)
VDBG_09973Deoxyribodipyrimidine photo-lyase. (589 aa)
VDBG_09707Pyruvate decarboxylase. (110 aa)
VDBG_09704Pyruvate decarboxylase. (555 aa)
VDBG_09508Isochorismate synthase/isochorismate-pyruvate lyase mbtI. (397 aa)
VDBG_08524DUF4396 domain-containing protein. (210 aa)
PSD1Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily. (525 aa)
VDBG_09557Dihydrodipicolinate synthetase family protein; Belongs to the DapA family. (324 aa)
VDBG_09289Phosphoenolpyruvate carboxykinase. (164 aa)
VDBG_09270Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (362 aa)
VDBG_08573Uncharacterized protein. (801 aa)
VDBG_10090Stress responsive A/B barrel domain-containing protein. (128 aa)
VDBG_09992Decarboxylase DEC1. (233 aa)
VDBG_06316Oxidoreductase. (126 aa)
VDBG_06431S-adenosylmethionine decarboxylase proenzyme. (476 aa)
VDBG_06681Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. (773 aa)
VDBG_06716Molybdenum cofactor biosynthesis protein C. (46 aa)
VDBG_07090Pyruvate decarboxylase. (330 aa)
VDBG_07379Zn(II)2Cys6 transcriptional activator. (535 aa)
VDBG_07509Cysteine sulfinic acid decarboxylase. (182 aa)
VDBG_07510Xylulose-5-phosphate phosphoketolase. (342 aa)
VDBG_07530Oxalate decarboxylase oxdC. (480 aa)
VDBG_07621Uncharacterized protein. (266 aa)
VDBG_08054DlpA domain-containing protein. (232 aa)
VDBG_080683,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. (233 aa)
VDBG_08158Dihydrodipicolinate synthase. (377 aa)
VDBG_08323Histidine decarboxylase. (397 aa)
VDBG_08523Glutamate decarboxylase. (464 aa)
VDBG_06315Ketose-bisphosphate aldolase class-II family protein. (356 aa)
VDBG_06096Citrate lyase subunit beta. (253 aa)
VDBG_05875Threonine aldolase. (389 aa)
VDBG_05624Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (286 aa)
VDBG_05398Anthranilate synthase component 1. (523 aa)
VDBG_05363Orotidine-5'-phosphate decarboxylase. (161 aa)
VDBG_05362Uncharacterized protein. (695 aa)
VDBG_05290Sphingosine-1-phosphate lyase. (566 aa)
VDBG_05072Dihydrodipicolinate synthase; Belongs to the DapA family. (331 aa)
VDBG_04892Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. (613 aa)
VDBG_04494Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (366 aa)
VDBG_03673Pyruvate decarboxylase. (524 aa)
VDBG_04273C2 domain-containing protein. (687 aa)
VDBG_04040Ornithine decarboxylase. (165 aa)
VDBG_02769Acetolactate synthase; Belongs to the TPP enzyme family. (473 aa)
VDBG_02746Xylulose-5-phosphate phosphoketolase. (787 aa)
VDBG_02402Uncharacterized protein. (428 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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