(20 nodes) Deaminase activity network (Verticillium alfalfae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDBG_08002	Glucosamine-6-phosphate isomerase. (371 aa)
	VDBG_09434	Zn(2)-C6 fungal-type domain-containing protein. (727 aa)
	VDBG_09874	Glucosamine-6-phosphate isomerase. (319 aa)
	VDBG_10192	AcdS. (62 aa)
	VDBG_04748	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (163 aa)
	VDBG_03300	Zn(2)-C6 fungal-type domain-containing protein. (619 aa)
	VDBG_03154	Translation initiation inhibitor. (154 aa)
	VDBG_02061	tRNA-specific adenosine deaminase. (362 aa)
	VDBG_01925	CMP/dCMP-type deaminase domain-containing protein. (405 aa)
	VDBG_06357	Predicted protein. (299 aa)
	VDBG_07761	Adenosine deaminase. (363 aa)
	VDBG_07914	A_deaminase domain-containing protein. (599 aa)
	VDBG_08412	A_deaminase domain-containing protein. (559 aa)
	VDBG_00396	HMF1. (126 aa)
	VDBG_01237	Adenosine deaminase. (365 aa)
	VDBG_00568	Adenosine deaminase family protein. (457 aa)
	VDBG_05794	Adenosine deaminase. (282 aa)
	VDBG_05096	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. (929 aa)
	VDBG_05988	Mmf1. (118 aa)
	VDBG_06356	Uncharacterized protein. (179 aa)

Your Current Organism:

Verticillium alfalfae

NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDBG_00568	VDBG_01237	C9S6E8	C9S666	Adenosine deaminase family protein.	Adenosine deaminase.	0.900
VDBG_00568	VDBG_05794	C9S6E8	C9SJS1	Adenosine deaminase family protein.	Adenosine deaminase.	0.923
VDBG_00568	VDBG_07761	C9S6E8	C9SS86	Adenosine deaminase family protein.	Adenosine deaminase.	0.907
VDBG_00568	VDBG_07914	C9S6E8	C9SSN9	Adenosine deaminase family protein.	A_deaminase domain-containing protein.	0.912
VDBG_00568	VDBG_08412	C9S6E8	C9STZ1	Adenosine deaminase family protein.	A_deaminase domain-containing protein.	0.908
VDBG_01237	VDBG_00568	C9S666	C9S6E8	Adenosine deaminase.	Adenosine deaminase family protein.	0.900
VDBG_01237	VDBG_05794	C9S666	C9SJS1	Adenosine deaminase.	Adenosine deaminase.	0.912
VDBG_01237	VDBG_07761	C9S666	C9SS86	Adenosine deaminase.	Adenosine deaminase.	0.900
VDBG_01237	VDBG_07914	C9S666	C9SSN9	Adenosine deaminase.	A_deaminase domain-containing protein.	0.900
VDBG_01237	VDBG_08412	C9S666	C9STZ1	Adenosine deaminase.	A_deaminase domain-containing protein.	0.900
VDBG_01925	VDBG_02061	C9SBT2	C9SC68	CMP/dCMP-type deaminase domain-containing protein.	tRNA-specific adenosine deaminase.	0.614
VDBG_01925	VDBG_04748	C9SBT2	C9SI66	CMP/dCMP-type deaminase domain-containing protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.678
VDBG_01925	VDBG_05794	C9SBT2	C9SJS1	CMP/dCMP-type deaminase domain-containing protein.	Adenosine deaminase.	0.506
VDBG_02061	VDBG_01925	C9SC68	C9SBT2	tRNA-specific adenosine deaminase.	CMP/dCMP-type deaminase domain-containing protein.	0.614
VDBG_02061	VDBG_04748	C9SC68	C9SI66	tRNA-specific adenosine deaminase.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.530
VDBG_04748	VDBG_01925	C9SI66	C9SBT2	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	CMP/dCMP-type deaminase domain-containing protein.	0.678
VDBG_04748	VDBG_02061	C9SI66	C9SC68	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	tRNA-specific adenosine deaminase.	0.530
VDBG_04748	VDBG_05794	C9SI66	C9SJS1	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Adenosine deaminase.	0.512
VDBG_05096	VDBG_05794	C9SJW9	C9SJS1	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	Adenosine deaminase.	0.645
VDBG_05096	VDBG_07761	C9SJW9	C9SS86	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	Adenosine deaminase.	0.597