STRINGSTRING
VDBG_09395 VDBG_09395 VDBG_01057 VDBG_01057 VDBG_02160 VDBG_02160 VDBG_05648 VDBG_05648 VDBG_06026 VDBG_06026 VDBG_06111 VDBG_06111 VDBG_06432 VDBG_06432 VDBG_06546 VDBG_06546 VDBG_06750 VDBG_06750 VDBG_07132 VDBG_07132 VDBG_07375 VDBG_07375 VDBG_07793 VDBG_07793 VDBG_07796 VDBG_07796 VDBG_08416 VDBG_08416 VDBG_08621 VDBG_08621 VDBG_08669 VDBG_08669 VDBG_08670 VDBG_08670 VDBG_08671 VDBG_08671 VDBG_09457 VDBG_09457 VDBG_09895 VDBG_09895 VDBG_10024 VDBG_10024 VDBG_10089 VDBG_10089 VDBG_00939 VDBG_00939 VDBG_00597 VDBG_00597 VDBG_02297 VDBG_02297 VDBG_01940 VDBG_01940 VDBG_02559 VDBG_02559 VDBG_02657 VDBG_02657 VDBG_02695 VDBG_02695 VDBG_04230 VDBG_04230 VDBG_03846 VDBG_03846 VDBG_05181 VDBG_05181 VDBG_05307 VDBG_05307 VDBG_05628 VDBG_05628
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_09395Uncharacterized protein. (517 aa)
VDBG_01057Ribokinase. (188 aa)
VDBG_02160Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (284 aa)
VDBG_056482,5-diketo-D-gluconic acid reductase A. (277 aa)
VDBG_06026Glucose and ribitol dehydrogenase. (270 aa)
VDBG_06111Uncharacterized protein. (425 aa)
VDBG_06432GFO_IDH_MocA domain-containing protein. (422 aa)
VDBG_06546Sorbitol dehydrogenase. (310 aa)
VDBG_06750Xylulose kinase. (373 aa)
VDBG_07132NADP:D-xylose dehydrogenase. (392 aa)
VDBG_07375Sorbitol dehydrogenase. (376 aa)
VDBG_077932,5-diketo-D-gluconic acid reductase A. (227 aa)
VDBG_07796Predicted protein. (567 aa)
VDBG_08416Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (305 aa)
VDBG_086212,5-diketo-D-gluconic acid reductase A. (268 aa)
VDBG_08669Aldo-keto reductase. (107 aa)
VDBG_086702,5-diketo-D-gluconic acid reductase A. (78 aa)
VDBG_08671Uncharacterized protein. (282 aa)
VDBG_094572-(S)-hydroxypropyl-CoM dehydrogenase. (283 aa)
VDBG_09895Sorbitol dehydrogenase. (353 aa)
VDBG_100243-oxoacyl-[acyl-carrier-protein] reductase. (250 aa)
VDBG_10089Oxidoreductase ucpA. (280 aa)
VDBG_00939Sorbitol dehydrogenase. (392 aa)
VDBG_005973-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (284 aa)
VDBG_02297Cyclopentanol dehydrogenase. (291 aa)
VDBG_01940Sorbitol dehydrogenase. (378 aa)
VDBG_02559Aldo-keto reductase family 1 member E1. (288 aa)
VDBG_02657L-xylulose reductase. (265 aa)
VDBG_02695GCY. (315 aa)
VDBG_04230Predicted protein. (166 aa)
VDBG_03846NAD(P)H-dependent D-xylose reductase. (334 aa)
VDBG_05181NADP-dependent mannitol dehydrogenase. (225 aa)
VDBG_05307Predicted protein. (176 aa)
VDBG_05628General stress protein. (313 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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