STRINGSTRING
VDBG_05987 VDBG_05987 VDBG_06704 VDBG_06704 VDBG_07056 VDBG_07056 VDBG_07057 VDBG_07057 VDBG_07592 VDBG_07592 VDBG_07802 VDBG_07802 VDBG_07803 VDBG_07803 VDBG_08052 VDBG_08052 VDBG_09479 VDBG_09479 VDBG_09824 VDBG_09824 VDBG_17013 VDBG_17013 VDBG_01990 VDBG_01990 VDBG_01186 VDBG_01186 VDBG_00412 VDBG_00412 VDBG_00604 VDBG_00604 VDBG_00614 VDBG_00614 VDBG_02260 VDBG_02260 VDBG_01502 VDBG_01502 VDBG_02466 VDBG_02466 VDBG_01988 VDBG_01988 VDBG_03405 VDBG_03405 VDBG_04168 VDBG_04168 VDBG_03683 VDBG_03683 VDBG_04666 VDBG_04666 VDBG_04705 VDBG_04705 VDBG_04907 VDBG_04907 VDBG_05819 VDBG_05819
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_05987Predicted protein. (119 aa)
VDBG_06704zf-CHCC domain-containing protein. (168 aa)
VDBG_07056Uncharacterized protein. (67 aa)
VDBG_07057Uncharacterized protein. (292 aa)
VDBG_07592Uncharacterized protein. (149 aa)
VDBG_07802Cytochrome c oxidase polypeptide IV. (194 aa)
VDBG_07803Predicted protein. (523 aa)
VDBG_08052Ubiquinol-cytochrome c reductase complex subunit. (151 aa)
VDBG_09479Acetyltransferase. (289 aa)
VDBG_09824NADH-ubiquinone oxidoreductase 23 kDa subunit. (149 aa)
VDBG_17013Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex. (208 aa)
VDBG_01990Complex I intermediate-associated protein. (184 aa)
VDBG_01186Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (232 aa)
VDBG_00412DUF339 domain-containing protein. (238 aa)
VDBG_00604Cytochrome b-c1 complex subunit 8. (106 aa)
VDBG_00614Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. (127 aa)
VDBG_02260NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (176 aa)
VDBG_01502Cytochrome b-c1 complex subunit 2. (457 aa)
VDBG_02466NADH:ubiquinone oxidoreductase 20.1kD subunit. (176 aa)
VDBG_01988Cytochrome c oxidase subunit VIa; Belongs to the cytochrome c oxidase subunit 6A family. (133 aa)
VDBG_03405Cytochrome c oxidase polypeptide V. (168 aa)
VDBG_04168Cytochrome c oxidase polypeptide VI. (160 aa)
VDBG_03683Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. (181 aa)
VDBG_04666Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (671 aa)
VDBG_04705NADH-ubiquinone oxidoreductase 49 kDa subunit; Belongs to the complex I 49 kDa subunit family. (472 aa)
VDBG_04907Cytochrome c1. (318 aa)
VDBG_05819Uncharacterized protein. (81 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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