STRINGSTRING
VDBG_08081 VDBG_08081 VDBG_08295 VDBG_08295 VDBG_08310 VDBG_08310 VDBG_08350 VDBG_08350 VDBG_08355 VDBG_08355 VDBG_08495 VDBG_08495 VDBG_08600 VDBG_08600 VDBG_08665 VDBG_08665 VDBG_08783 VDBG_08783 VDBG_09051 VDBG_09051 VDBG_09059 VDBG_09059 VDBG_09284 VDBG_09284 VDBG_09285 VDBG_09285 VDBG_09596 VDBG_09596 VDBG_09352 VDBG_09352 VDBG_09354 VDBG_09354 VDBG_09427 VDBG_09427 VDBG_09444 VDBG_09444 VDBG_09507 VDBG_09507 VDBG_09689 VDBG_09689 VDBG_09934 VDBG_09934 VDBG_10195 VDBG_10195 VDBG_05418 VDBG_05418 VDBG_05555 VDBG_05555 VDBG_05556 VDBG_05556 VDBG_05573 VDBG_05573 VDBG_06135 VDBG_06135 VDBG_06154 VDBG_06154 VDBG_06212 VDBG_06212 VDBG_06446 VDBG_06446 VDBG_06590 VDBG_06590 VDBG_06637 VDBG_06637 VDBG_06652 VDBG_06652 VDBG_06672 VDBG_06672 VDBG_06683 VDBG_06683 VDBG_06784 VDBG_06784 VDBG_06832 VDBG_06832 VDBG_06878 VDBG_06878 VDBG_06891 VDBG_06891 VDBG_07147 VDBG_07147 VDBG_07166 VDBG_07166 VDBG_07345 VDBG_07345 VDBG_07451 VDBG_07451 VDBG_07537 VDBG_07537 VDBG_07544 VDBG_07544 VDBG_07770 VDBG_07770 VDBG_07781 VDBG_07781 VDBG_07823 VDBG_07823 VDBG_07961 VDBG_07961 VDBG_07988 VDBG_07988 VDBG_08034 VDBG_08034 VDBG_00264 VDBG_00264 VDBG_01136 VDBG_01136 VDBG_01266 VDBG_01266 VDBG_00650 VDBG_00650 VDBG_00664 VDBG_00664 VDBG_00728 VDBG_00728 VDBG_01345 VDBG_01345 VDBG_01031 VDBG_01031 VDBG_00096 VDBG_00096 VDBG_02181 VDBG_02181 VDBG_01545 VDBG_01545 VDBG_01568 VDBG_01568 VDBG_01577 VDBG_01577 VDBG_01579 VDBG_01579 VDBG_01589 VDBG_01589 VDBG_01653 VDBG_01653 VDBG_01678 VDBG_01678 VDBG_01734 VDBG_01734 VDBG_01748 VDBG_01748 VDBG_01823 VDBG_01823 VDBG_01938 VDBG_01938 VDBG_01984 VDBG_01984 VDBG_02826 VDBG_02826 VDBG_02829 VDBG_02829 VDBG_02862 VDBG_02862 VDBG_03172 VDBG_03172 VDBG_03173 VDBG_03173 VDBG_02521 VDBG_02521 VDBG_02548 VDBG_02548 VDBG_02549 VDBG_02549 VDBG_03360 VDBG_03360 VDBG_03394 VDBG_03394 VDBG_03395 VDBG_03395 VDBG_02654 VDBG_02654 VDBG_04007 VDBG_04007 VDBG_04019 VDBG_04019 VDBG_03493 VDBG_03493 VDBG_03532 VDBG_03532 VDBG_04208 VDBG_04208 VDBG_03564 VDBG_03564 VDBG_04282 VDBG_04282 VDBG_03700 VDBG_03700 VDBG_03716 VDBG_03716 VDBG_03755 VDBG_03755 VDBG_03792 VDBG_03792 VDBG_03820 VDBG_03820 VDBG_04577 VDBG_04577 VDBG_04787 VDBG_04787 VDBG_04818 VDBG_04818 VDBG_04859 VDBG_04859 VDBG_04893 VDBG_04893 VDBG_04341 VDBG_04341 VDBG_05750 VDBG_05750 VDBG_05751 VDBG_05751 VDBG_05758 VDBG_05758 ALG14 ALG14 VDBG_05095 VDBG_05095 VDBG_05164 VDBG_05164 VDBG_05188 VDBG_05188 VDBG_05212 VDBG_05212 VDBG_05286 VDBG_05286 VDBG_05289 VDBG_05289
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_08081Uncharacterized protein. (352 aa)
VDBG_0829526S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (884 aa)
VDBG_08310SNAP-25. (158 aa)
VDBG_08350LDB19 domain-containing protein. (408 aa)
VDBG_08355Uncharacterized protein. (52 aa)
VDBG_08495Pre-mRNA polyadenylation factor FIP1. (183 aa)
VDBG_08600Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex. (254 aa)
VDBG_08665CRIB domain-containing protein. (787 aa)
VDBG_08783Peroxin 8. (689 aa)
VDBG_09051SCF E3 ubiquitin ligase complex F-box protein grrA. (769 aa)
VDBG_09059AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family. (308 aa)
VDBG_09284BTB domain and ankyrin repeat protein. (1211 aa)
VDBG_09285BTB domain and ankyrin repeat protein. (252 aa)
VDBG_09596Zn(2)-C6 fungal-type domain-containing protein. (456 aa)
VDBG_09352SNARE domain-containing protein; Belongs to the syntaxin family. (360 aa)
VDBG_09354AP-1 complex subunit gamma. (837 aa)
VDBG_09427Endosome protein. (354 aa)
VDBG_09444Ubiquitin-like domain-containing protein. (744 aa)
VDBG_09507Uncharacterized protein. (305 aa)
VDBG_09689Vacuole morphology and inheritance protein. (894 aa)
VDBG_09934Vta1 domain-containing protein. (253 aa)
VDBG_10195Autophagy protein. (199 aa)
VDBG_05418Zn(2)-C6 fungal-type domain-containing protein. (377 aa)
VDBG_05555Nuclear envelope protein. (638 aa)
VDBG_05556SNARE domain-containing protein; Belongs to the syntaxin family. (264 aa)
VDBG_05573Cupin domain-containing protein. (653 aa)
VDBG_06135C6 zinc finger domain-containing protein. (444 aa)
VDBG_06154Uncharacterized protein. (1298 aa)
VDBG_06212Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (857 aa)
VDBG_06446AP-1 complex subunit mu-1-I; Belongs to the adaptor complexes medium subunit family. (434 aa)
VDBG_06590C6 zinc finger domain-containing protein. (373 aa)
VDBG_06637Ste16. (1437 aa)
VDBG_06652LDB19. (380 aa)
VDBG_06672Calponin. (721 aa)
VDBG_06683Synaptobrevin. (314 aa)
VDBG_06784Vacuolar membrane protein pep3. (957 aa)
VDBG_06832Cullin-4B; Belongs to the cullin family. (777 aa)
VDBG_06878Uncharacterized protein. (162 aa)
VDBG_06891Peroxisomal biogenesis factor 3. (126 aa)
VDBG_07147V-SNARE. (170 aa)
VDBG_07166Rif1_N domain-containing protein. (1460 aa)
VDBG_07345SSO2. (400 aa)
VDBG_07451Uncharacterized protein. (851 aa)
VDBG_07537CreD. (433 aa)
VDBG_07544Armadillo/beta-catenin-like repeat-containing protein. (502 aa)
VDBG_07770Arrestin domain-containing protein. (952 aa)
VDBG_07781Predicted protein. (153 aa)
VDBG_07823Guanine nucleotide-binding protein subunit beta. (324 aa)
VDBG_07961Uncharacterized protein. (97 aa)
VDBG_07988Arrestin domain-containing protein. (256 aa)
VDBG_08034Eukaryotic translation initiation factor 2C 3. (928 aa)
VDBG_00264AP-1 complex subunit sigma-1. (157 aa)
VDBG_01136Transmembrane domain-containing protein. (173 aa)
VDBG_01266SUN domain-containing protein. (771 aa)
VDBG_00650Nuclear envelope protein Cut8; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (203 aa)
VDBG_00664SSOI. (332 aa)
VDBG_00728F-box and WD domain-containing protein. (1249 aa)
VDBG_01345HTH APSES-type domain-containing protein. (418 aa)
VDBG_01031AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
VDBG_00096Transport protein sec22; Belongs to the synaptobrevin family. (217 aa)
VDBG_02181Synaptobrevin. (120 aa)
VDBG_01545Uncharacterized protein. (109 aa)
VDBG_01568AP-1 complex subunit gamma; Belongs to the adaptor complexes large subunit family. (723 aa)
VDBG_01577Vesicle transport v-SNARE protein. (230 aa)
VDBG_01579Uncharacterized protein. (1145 aa)
VDBG_01589Alpha-soluble NSF attachment protein. (292 aa)
VDBG_01653Uncharacterized protein. (1085 aa)
VDBG_01678WD repeat-containing protein. (1492 aa)
VDBG_01734Uncharacterized protein. (228 aa)
VDBG_01748WD repeat-containing protein mip1. (1430 aa)
VDBG_01823Uncharacterized protein. (246 aa)
VDBG_01938Syntaxin-5. (312 aa)
VDBG_01984SLA2. (1032 aa)
VDBG_02826Alpha-actinin-1. (717 aa)
VDBG_02829Zn(2)-C6 fungal-type domain-containing protein. (511 aa)
VDBG_02862F-box/WD repeat-containing protein 1A. (1033 aa)
VDBG_03172LDB19. (532 aa)
VDBG_03173Secreted glucosidase. (151 aa)
VDBG_02521Sulfur controller 2. (646 aa)
VDBG_02548Predicted protein. (240 aa)
VDBG_02549F-box/WD repeat-containing protein 1A. (262 aa)
VDBG_03360Inner centromere protein mis6. (450 aa)
VDBG_03394Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (200 aa)
VDBG_03395Shugoshin. (429 aa)
VDBG_02654V-SNARE. (284 aa)
VDBG_04007V-SNARE. (284 aa)
VDBG_04019Uncharacterized protein. (348 aa)
VDBG_03493Scd2/ral3. (596 aa)
VDBG_03532PaxU. (128 aa)
VDBG_04208WD repeat-containing protein. (707 aa)
VDBG_03564Argonaute. (960 aa)
VDBG_04282Arrestin. (568 aa)
VDBG_03700Transcription elongation factor S-II. (287 aa)
VDBG_03716F-box protein pof7. (522 aa)
VDBG_03755Peroxisomal membrane protein PAS20. (430 aa)
VDBG_03792SpaA. (870 aa)
VDBG_03820Uncharacterized protein. (1007 aa)
VDBG_04577Sec20 domain-containing protein. (411 aa)
VDBG_04787Predicted protein. (347 aa)
VDBG_04818Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (224 aa)
VDBG_04859pH-response regulator protein palF/RIM8. (835 aa)
VDBG_04893Uncharacterized protein. (456 aa)
VDBG_04341Csm1 domain-containing protein. (425 aa)
VDBG_05750Conserved leucine-rich repeat protein. (1138 aa)
VDBG_05751Conserved leucine-rich repeat protein. (452 aa)
VDBG_05758Vacuolar membrane protein. (802 aa)
ALG14UDP-N-acetylglucosamine transferase subunit ALG14; Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway. Anchors the catalytic subunit ALG13 to the ER. (283 aa)
VDBG_05095Cytoskeleton assembly control protein SLA1. (1132 aa)
VDBG_05164Synaptobrevin; Belongs to the synaptobrevin family. (205 aa)
VDBG_05188Uncharacterized protein. (351 aa)
VDBG_05212Uncharacterized protein. (986 aa)
VDBG_05286Predicted protein. (474 aa)
VDBG_05289Predicted protein. (337 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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